RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TANC2Q9HCD6 1990 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 FAM90A9PA6NNJ1 464 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 F5H0A9 414 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 DVL1O14640 695 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 HPRT1P00492 218 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 TPT1P13693 172 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 NFYBP25208 207 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 LPAR6P43657 344 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 LOXL3P58215 753 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 RPL23AP62750 156 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 IFITM2Q01629 132 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 IL15RAQ13261 267 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 FAM71F2Q6NXP2 309 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 SPAG16Q8N0X2 631 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 TNFRSF14Q92956 283 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 RAB40CQ96S21 281 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 CLCC1Q96S66 551 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 UBTD1Q9HAC8 227 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 RPUSD1Q9UJJ7 312 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 RNF150Q9ULK6 438 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 MMP24Q9Y5R2 645 aa8.88□□□□□ -0.99
TRAPPC4-201ENST00000359005 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 IGHV3-43A0A0B4J1X8 118 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 TNFRSF13BO14836 293 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 PPIHO43447 177 aaKnown RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 JTBO76095 146 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 F12P00748 615 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 IGHV2-70P01814 119 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 DANCRP0C864 163 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 IGHV3-43DP0DP04 118 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 RPL12P30050 165 aaKnown RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 PRRX1P54821 245 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 LTC4SQ16873 150 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 RTL8BQ17RB0 113 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 C17orf58Q2M2W7 97 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 DHRS7BQ6IAN0 325 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 C11orf71Q6IPW1 123 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 Q71RC1 249 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 FOXRED2Q8IWF2 684 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR8H3Q8N146 312 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR4D5Q8NGN0 318 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR4S2Q8NH73 311 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 UBALD1Q8TB05 177 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 SCARB1Q8WTV0 552 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 AGMATQ9BSE5 352 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 SDHAF2Q9NX18 166 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 PRR13Q9NZ81 148 aa8.87□□□□□ -0.99
TRAPPC4-201ENST00000359005 M0R1X1 148 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 TOR1AO14656 332 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 HRASP01112 189 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 IGLV2-14P01704 120 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 MBPP02686 304 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 TFF1P04155 84 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 HOXB4P17483 251 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 S100A1P23297 94 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 EFNA4P52798 201 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 RIPPLY3P57055 190 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 RPP30P78346 268 aaKnown RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 BAXQ07812 192 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 STX12Q86Y82 276 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 TMEM186Q96B77 213 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 CIB3Q96Q77 187 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 DCTN5Q9BTE1 182 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 RNF126Q9BV68 326 aa8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 BEX4Q9NWD9 120 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 SONP18583 2426 aaKnown RBP8.86□□□□□ -0.99
TRAPPC4-201ENST00000359005 SVEP1Q4LDE5 3571 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 RNF222A6NCQ9 220 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 MPTX1A8MV57 137 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 TXNL1O43396 289 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 RBMXL2O75526 392 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 APOA2P02652 100 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 GAPDHP04406 335 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 LIPFP07098 398 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 NQO2P16083 231 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 COL8A2P25067 703 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 DUTP33316 252 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 GPR6P46095 362 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 TAS2R30P59541 319 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 ID3Q02535 119 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 ZNF266Q14584 549 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 TMEM200BQ69YZ2 307 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 SLC25A48Q6ZT89 311 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 C5orf24Q7Z6I8 188 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 LYG1Q8N1E2 194 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 FGFRL1Q8N441 504 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 LINC00311Q8N616 119 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR10X1Q8NGY0 326 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 OR9G1Q8NH87 305 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 LHFPL5Q8TAF8 219 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 STOML3Q8TAV4 291 aa8.85□□□□□ -0.99
TRAPPC4-201ENST00000359005 ST8SIA2Q92186 375 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms