RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 RBFOX2O43251 390 aaKnown RBP eCLIP7.52□□□□□ -1.2
UPF2-202ENST00000357604 SELLP14151 372 aa7.52□□□□□ -1.2
UPF2-202ENST00000357604 FAM106AQ4KMX7 169 aa7.52□□□□□ -1.2
UPF2-202ENST00000357604 ACSM6Q6P461 480 aa7.52□□□□□ -1.2
UPF2-202ENST00000357604 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.2
UPF2-202ENST00000357604 SLC25A38Q96DW6 304 aa7.52□□□□□ -1.2
UPF2-202ENST00000357604 C22orf46C9J442 243 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 RRHO14718 337 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 HLA-DQB1P01920 261 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 SPRNQ5BIV9 151 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 OR1S2Q8NGQ3 325 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 SLIRPQ9GZT3 109 aaKnown RBP7.52□□□□□ -1.21
UPF2-202ENST00000357604 SRRQ9GZT4 340 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 SLA2Q9H6Q3 261 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 TRAV30A0A087WSZ9 112 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 A0A1B0GU03 582 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 FAM90A9PA6NNJ1 464 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 LDLRAD4O15165 306 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 FGF16O43320 207 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 KRASP01116 189 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 HLA-GP17693 338 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 DEFB112Q30KQ8 113 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 RSRP1Q9BUV0 290 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
UPF2-202ENST00000357604 DCAF16Q9NXF7 216 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 GAB2Q9UQC2 676 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 FBXO7Q9Y3I1 522 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 PGLYRP1O75594 196 aaPredicted RBP7.52□□□□□ -1.21
UPF2-202ENST00000357604 RAB14P61106 215 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 QRFPP83859 136 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 OR4F17Q8NGA8 305 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 OR4F4Q96R69 305 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 HEATR5AQ86XA9 2040 aa7.52□□□□□ -1.21
UPF2-202ENST00000357604 A0A0U1RQK1 487 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 CHST1O43916 411 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 NPBWR1P48145 328 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 TPPP2P59282 170 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 RELQ04864 619 aaPredicted RBP7.51□□□□□ -1.21
UPF2-202ENST00000357604 RPL39P5Q59GN2 51 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 GLYATL2Q8WU03 294 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 TBX15Q96SF7 602 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 CENPVL3A0A0U1RRI6 287 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 SNRPGP15A8MWD9 76 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 TNFRSF13BO14836 293 aaPredicted RBP7.51□□□□□ -1.21
UPF2-202ENST00000357604 NAPSAO96009 420 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 PLA2G7Q13093 441 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 GLDNQ6ZMI3 551 aaPredicted RBP7.51□□□□□ -1.21
UPF2-202ENST00000357604 CXorf58Q96LI9 332 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 GINS3Q9BRX5 216 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 OR51J1Q9H342 316 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 SLC2A9Q9NRM0 540 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 CUL9Q8IWT3 2517 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 ST8SIA3O43173 380 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 SLC25A17O43808 307 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 DFFBO76075 338 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 NDUFB6O95139 128 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 IAH1Q2TAA2 248 aaPredicted RBP7.51□□□□□ -1.21
UPF2-202ENST00000357604 UBAC2Q8NBM4 344 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 C1orf159Q96HA4 380 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 TCF19Q9Y242 345 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 FOXA2Q9Y261 457 aaPredicted RBP7.51□□□□□ -1.21
UPF2-202ENST00000357604 MMP24Q9Y5R2 645 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 CD74P04233 296 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 OR4E1P0C645 316 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 C2orf68Q2NKX9 166 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 DHRS11Q6UWP2 260 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 OR4C12Q96R67 309 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 RAB40CQ96S21 281 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 PSENENQ9NZ42 101 aa7.51□□□□□ -1.21
UPF2-202ENST00000357604 F8VVB4 439 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 F8VWA3 439 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 CRLF1O75462 422 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 IL5P05113 134 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 ZFP36P26651 326 aaKnown RBP7.5□□□□□ -1.21
UPF2-202ENST00000357604 OPRK1P41145 380 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 C17orf58Q2M2W7 97 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 ZNF880Q6PDB4 577 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 QTRT1Q9BXR0 403 aaKnown RBP7.5□□□□□ -1.21
UPF2-202ENST00000357604 DOCK7Q96N67 2140 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 TRAV41A0A0B4J266 112 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 TRGV3P03979 118 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 LSAMPQ13449 338 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 TEX38Q6PEX7 206 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 ZNF833PQ6ZTB9 187 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 LY6G5BQ8NDX9 201 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 PINX1Q96BK5 328 aaKnown RBP7.5□□□□□ -1.21
UPF2-202ENST00000357604 SRSF8Q9BRL6 282 aaKnown RBP7.5□□□□□ -1.21
UPF2-202ENST00000357604 FXYD6Q9H0Q3 95 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 NCKAP5O14513 1909 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 A0A1W2PS18 150 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 NAT1P18440 290 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 UBE2KP61086 200 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 PAFAH1B2P68402 229 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 PDLIM3Q53GG5 364 aaPredicted RBP7.5□□□□□ -1.21
UPF2-202ENST00000357604 LAMTOR1Q6IAA8 161 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 MBNL3Q9NUK0 354 aaKnown RBP7.5□□□□□ -1.21
UPF2-202ENST00000357604 TMEM140Q9NV12 185 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 OR10P1Q8NGE3 313 aa7.5□□□□□ -1.21
UPF2-202ENST00000357604 RBM14Q96PK6 669 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms