RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 KCNAB3O43448 404 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 RLN2P04090 185 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 THBS3P49746 956 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 PRB3Q04118 309 aaPredicted RBP16.78■□□□□ 0.28
TRIM4-202ENST00000354241 C8orf31Q8N9H6 132 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 INO80EQ8NBZ0 244 aaPredicted RBP16.78■□□□□ 0.28
TRIM4-202ENST00000354241 CLDND2Q8NHS1 167 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 FAM168AQ92567 244 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 PERPQ96FX8 193 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 PIMREGQ9BSJ6 248 aa16.78■□□□□ 0.28
TRIM4-202ENST00000354241 BARX1Q9HBU1 254 aaPredicted RBP16.78■□□□□ 0.28
TRIM4-202ENST00000354241 K7EPK0 472 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 KRASP01116 189 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 RBP4P02753 201 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 G6PCP35575 357 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 TMUB2Q71RG4 321 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 FAM71E2Q8N5Q1 922 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 LINC00311Q8N616 119 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 ZNF596Q8TC21 504 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 LRRK2Q5S007 2527 aa16.77■□□□□ 0.28
TRIM4-202ENST00000354241 A0A1B0GU03 582 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 TOR1AO14656 332 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 DEDDO75618 318 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ATG12O94817 140 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 NXPH3O95157 252 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 LYL1P12980 280 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 C4BPBP20851 252 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 KIR2DS2P43631 304 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 NKX2-1P43699 371 aaPredicted RBP16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ARF6P62330 175 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 OPCMLQ14982 345 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 NDUFA5Q16718 116 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ADTRPQ96IZ2 230 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ARL6Q9H0F7 186 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 CACNG5Q9UF02 275 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 UTP20O75691 2785 aaKnown RBP16.76■□□□□ 0.27
TRIM4-202ENST00000354241 KIAA1324LA8MWY0 1029 aaPredicted RBP16.76■□□□□ 0.27
TRIM4-202ENST00000354241 RGS13O14921 159 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ST8SIA3O43173 380 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ZFP36P26651 326 aaKnown RBP16.76■□□□□ 0.27
TRIM4-202ENST00000354241 S100A11P31949 105 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ZNF787Q6DD87 383 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 CLEC2AQ6UVW9 174 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ZNF833PQ6ZTB9 187 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ACOT7LQ6ZUV0 252 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ZNF383Q8NA42 475 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 DDB2Q92466 427 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 GON7Q9BXV9 100 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 SLA2Q9H6Q3 261 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 ZFP57Q9NU63 452 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 POMT1Q9Y6A1 747 aa16.76■□□□□ 0.27
TRIM4-202ENST00000354241 IGHV2-26A0A0B4J1V2 119 aa16.75■□□□□ 0.27
TRIM4-202ENST00000354241 RNF222A6NCQ9 220 aa16.75■□□□□ 0.27
TRIM4-202ENST00000354241 SLC25A6P12236 298 aa16.75■□□□□ 0.27
TRIM4-202ENST00000354241 COX7A1P24310 79 aa16.75■□□□□ 0.27
TRIM4-202ENST00000354241 CXorf66Q5JRM2 361 aaPredicted RBP16.75■□□□□ 0.27
TRIM4-202ENST00000354241 Q6ZRM9 215 aa16.75■□□□□ 0.27
TRIM4-202ENST00000354241 RCL1Q9Y2P8 373 aaKnown RBP16.75■□□□□ 0.27
TRIM4-202ENST00000354241 MMP24Q9Y5R2 645 aa16.75■□□□□ 0.27
TRIM4-202ENST00000354241 OR2F2O95006 317 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 HPRT1P00492 218 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 NUP62P37198 522 aaPredicted RBP16.74■□□□□ 0.27
TRIM4-202ENST00000354241 LMO4P61968 165 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 LCN2P80188 198 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 OR2F1Q13607 317 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 C10orf105Q8TEF2 133 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 R3HDM4Q96D70 268 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 CLEC7AQ9BXN2 247 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 A0A0D9SG52 128 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 RBFOX2O43251 390 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRIM4-202ENST00000354241 CT45A6P0DMU7 189 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 CT45A5P0DMU8 189 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 CT45A7P0DMV0 189 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 REG1BP48304 166 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 ZNF345Q14585 488 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 Q8N7P7 452 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 MAGT1Q9H0U3 335 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 PLEKHA2Q9HB19 425 aa16.74■□□□□ 0.27
TRIM4-202ENST00000354241 M0R1W7 72 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 NDUFS8O00217 210 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 PRRX1P54821 245 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 POLR2GP62487 172 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRIM4-202ENST00000354241 KCNRGQ8N5I3 272 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 OR4S2Q8NH73 311 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 TNFRSF14Q92956 283 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 TMEM186Q96B77 213 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 MRPL20Q9BYC9 149 aaKnown RBP16.73■□□□□ 0.27
TRIM4-202ENST00000354241 SIRT7Q9NRC8 400 aa16.73■□□□□ 0.27
TRIM4-202ENST00000354241 MARCH11A6NNE9 402 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 ENSAO43768 121 aaKnown RBP16.72■□□□□ 0.27
TRIM4-202ENST00000354241 PITX3O75364 302 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 IL3RAP26951 378 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 H2BFWTQ7Z2G1 175 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 MSGN1A6NI15 193 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 E5RGE8 158 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 CRYZL1O95825 349 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 DIAPH2-AS1Q14236 149 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 PNKDQ8N490 385 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 DMBX1Q8NFW5 382 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 HEXA-AS1Q9H8Q6 139 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms