RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FZR1Q9UM11 496 aa7.22□□□□□ -1.25
TRIM55-204ENST00000353317 TRAV24A0A0B4J272 114 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 CD300LBA8K4G0 201 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 CYB5R3P00387 301 aaPredicted RBP7.21□□□□□ -1.25
TRIM55-204ENST00000353317 IGLV2-14P01704 120 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 IAPPP10997 89 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 FABP4P15090 132 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 SELEP16581 610 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 DEFA6Q01524 100 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 PNRC1Q12796 327 aaPredicted RBP7.21□□□□□ -1.25
TRIM55-204ENST00000353317 GAMTQ14353 236 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF880Q6PDB4 577 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 MRPL21Q7Z2W9 205 aaKnown RBP7.21□□□□□ -1.25
TRIM55-204ENST00000353317 HAPLN4Q86UW8 402 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 MKXQ8IYA7 352 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 C1orf162Q8NEQ5 155 aaPredicted RBP7.21□□□□□ -1.25
TRIM55-204ENST00000353317 OR10J5Q8NHC4 309 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 NANOS1Q8WY41 292 aaKnown RBP7.21□□□□□ -1.25
TRIM55-204ENST00000353317 RCC1LQ96I51 464 aaKnown RBP7.21□□□□□ -1.25
TRIM55-204ENST00000353317 SFXN3Q9BWM7 321 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 SDF2L1Q9HCN8 221 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 CACNG5Q9UF02 275 aa7.21□□□□□ -1.25
TRIM55-204ENST00000353317 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-204ENST00000353317 IGHV3-64DA0A0J9YX35 117 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 SYNGR2O43760 224 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 PTBP3O95758 552 aaKnown RBP7.21□□□□□ -1.26
TRIM55-204ENST00000353317 SLC25A6P12236 298 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 MDKP21741 143 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF83P51522 516 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 PSG7Q13046 419 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 MRPL49Q13405 166 aaKnown RBP7.21□□□□□ -1.26
TRIM55-204ENST00000353317 TBC1D28Q2M2D7 210 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF525Q8N782 197 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 RNASE11Q8TAA1 199 aaKnown RBP7.21□□□□□ -1.26
TRIM55-204ENST00000353317 SLC25A40Q8TBP6 338 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 SCGB1C1Q8TD33 95 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 MBD3L1Q8WWY6 194 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 IL1F10Q8WWZ1 152 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 GFOD1Q9NXC2 390 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 OR1A1Q9P1Q5 309 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 FLNCQ14315 2725 aa7.21□□□□□ -1.26
TRIM55-204ENST00000353317 TRAV39A0A0B4J263 110 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 IGHV2OR16-5A0A0B4J2B6 119 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 IGKV1-5P01602 117 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 CD55P08174 381 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 PGA5P0DJD9 388 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 PPP1CBP62140 327 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 WDR86Q86TI4 376 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 GTF3AQ92664 365 aaKnown RBP7.2□□□□□ -1.26
TRIM55-204ENST00000353317 C14orf144Q96I85 54 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 SNX22Q96L94 193 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 CABLES2Q9BTV7 478 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 JKAMPQ9P055 326 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 TRBV24-1A0A075B6N3 115 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 TRGV8A0A0C4DH27 118 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 CA6P23280 308 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 S100GP29377 79 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 WDR25Q64LD2 544 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-204ENST00000353317 OR5A2Q8NGI9 324 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 KLF14Q8TD94 323 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-204ENST00000353317 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-204ENST00000353317 RIMS4Q9H426 269 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-204ENST00000353317 RBKSQ9H477 322 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 PSENENQ9NZ42 101 aa7.2□□□□□ -1.26
TRIM55-204ENST00000353317 TRBV6-6A0A0A6YYG2 114 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 CEBPZOSA8MTT3 80 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 MDH2P40926 338 aaKnown RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 LRRC75BQ2VPJ9 315 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 LRP11Q86VZ4 500 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 PRR18Q8N4B5 295 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 OR10V1Q8NGI7 309 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 P2RX4Q99571 388 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 HIST1H2BLQ99880 126 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 PLK3Q9H4B4 646 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 CDH20Q9HBT6 801 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 VAX2Q9UIW0 290 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 PPP1R3CQ9UQK1 317 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 KIAA2026Q5HYC2 2103 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 SPTAN1Q13813 2472 aaKnown RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 ANKHD1Q8IWZ3 2542 aaKnown RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 RHBDL1O75783 438 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 THBDP07204 575 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 GRNP28799 593 aaKnown RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 ELLP55199 621 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 SERF2P84101 59 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 TLE1Q04724 770 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 HNF4GQ14541 408 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 TESK1Q15569 626 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF585BQ52M93 769 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 TIMM23BQ5SRD1 257 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 Q6ZR03 302 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 MRGPRGQ86SM5 289 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 UBALD1Q8TB05 177 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 OR5P3Q8WZ94 311 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 LSM10Q969L4 123 aaKnown RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 OR4C12Q96R67 309 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 WDR61Q9GZS3 305 aaKnown RBP7.19□□□□□ -1.26
TRIM55-204ENST00000353317 RNF150Q9ULK6 438 aa7.19□□□□□ -1.26
TRIM55-204ENST00000353317 MAP1LC3B2A6NCE7 125 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms