RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RYDENQ9NUL5 291 aaKnown RBP15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 TMEM242Q9NWH2 141 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 SMG1Q96Q15 3661 aaKnown RBP15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 ST8SIA5O15466 376 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 PTBP3O95758 552 aaKnown RBP15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 CD59P13987 128 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 FFAR4Q5NUL3 377 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 OR4F5Q8NH21 305 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 OR4F4Q96R69 305 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 GAB2Q9UQC2 676 aa15.14■□□□□ 0.01
PTP4A3-202ENST00000349124 TMEM30CPA0ZSE6 113 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 FABP6P51161 128 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 RPL23P62829 140 aaKnown RBP15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 EIF4EBP1Q13541 118 aaPredicted RBP15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 PRSS8Q16651 343 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 OR13D1Q8NGV5 346 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 DTD1Q8TEA8 209 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 CADP27708 2225 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 PFN1P07737 140 aaKnown RBP15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 RAC2P15153 192 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 CD46P15529 392 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 OR13A1Q8NGR1 328 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 RAB24Q969Q5 203 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 PARLQ9H300 379 aa15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.13■□□□□ 0.01
PTP4A3-202ENST00000349124 ICE1Q9Y2F5 2266 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 TRBV24-1A0A075B6N3 115 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 PAGE4O60829 102 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 CNEP1R1Q8N9A8 125 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 PRO1933Q9H354 126 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 NAT8Q9UHE5 227 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 PSG11Q9UQ72 335 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 LAMP3Q9UQV4 416 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 ZNF729A6NN14 1252 aaPredicted RBP15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 IQCF6A8MYZ5 107 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 OPN1MWP04001 364 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 OPN1MW2P0DN77 364 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 OPN1MW3P0DN78 364 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 NPPCP23582 126 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 MRPL49Q13405 166 aaKnown RBP15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 BSXQ3C1V8 233 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 UNQ6494/PRO21346Q6UXR6 183 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 LURAP1LQ8IV03 231 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 OR10P1Q8NGE3 313 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 HIST1H2BLQ99880 126 aa15.12■□□□□ 0.01
PTP4A3-202ENST00000349124 PIGBOS1A0A0B4J2F0 54 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 CDX4O14627 284 aaPredicted RBP15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 IFNA1P01562 189 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 COL10A1Q03692 680 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 SRSF6Q13247 344 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 Q3ZCU0 254 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 OR10A7Q8NGE5 316 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 OR51G1Q8NGK1 321 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 PCGF1Q9BSM1 259 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 RNF212BA8MTL3 300 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 C1QTNF9BB2RNN3 333 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 FAM90A26D6RGX4 464 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 KBTBD11O94819 623 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 CYP2G1PQ6ZSU1 146 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 SSX9Q7RTT3 188 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 TRIB1Q96RU8 372 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 FAM234AQ9H0X4 552 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 HES4Q9HCC6 221 aa15.11■□□□□ 0.01
PTP4A3-202ENST00000349124 PCNX2A6NKB5 2137 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 CRYAAP02489 173 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 PSMB3P49720 205 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 EDDM3AQ14507 147 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 MSMO1Q15800 293 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 GABRA6Q16445 453 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 H2BFWTQ7Z2G1 175 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 CENPVQ7Z7K6 275 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 TMEM147Q9BVK8 224 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 NPCDR1Q9BY65 106 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 PROP1O75360 226 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 HIST1H1BP16401 226 aaKnown RBP15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 ACSF3Q4G176 576 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 ALKBH2Q6NS38 261 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 VKORC1L1Q8N0U8 176 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 NINJ1Q92982 152 aa15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 PACRGQ96M98 296 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 QTRT1Q9BXR0 403 aaKnown RBP15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-202ENST00000349124 GPX4P36969 197 aaPredicted RBP15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 WDR82Q6UXN9 313 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 ACP7Q6ZNF0 438 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 LINC00469Q8N7U9 141 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 MAP1BP46821 2468 aaKnown RBP15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 TRAV38-1A0A0B4J264 116 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 CTXND1A0A1B0GTU2 59 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 OOEPA6NGQ2 149 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 UBE2G2P60604 165 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 P2RY6Q15077 328 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 VWA1Q6PCB0 445 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 S100PBPQ96BU1 408 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 GMPPAQ96IJ6 420 aaPredicted RBP15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 FER1L6-AS2Q96M78 137 aa15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 EP300Q09472 2414 aaPredicted RBP15.09■□□□□ 0.01
PTP4A3-202ENST00000349124 A0A1W2PPQ1 181 aa15.08■□□□□ 0.01
PTP4A3-202ENST00000349124 GALR1P47211 349 aa15.08■□□□□ 0.01
PTP4A3-202ENST00000349124 SOX8P57073 446 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms