RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CACNA1DQ01668 2161 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 TIMP3P35625 211 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 FBLN7Q53RD9 439 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 BET1LQ9NYM9 111 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 NAT8BQ9UHF3 227 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 EML6Q6ZMW3 1958 aa12.96□□□□□ -0.34
LMNA-201ENST00000347559 TRANK1O15050 2925 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 TNFSF11O14788 317 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 TMPRSS2O15393 492 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 G6PCP35575 357 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 HTD2P86397 168 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 USF3Q68DE3 2245 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 SYNGR1O43759 233 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 ZNF253O75346 499 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 SYNGR4O95473 234 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 CCL2P13500 99 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 FGF12P61328 243 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
LMNA-201ENST00000347559 LCN12Q6JVE5 192 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 MKXQ8IYA7 352 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 ZIC4Q8N9L1 334 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 QTRT1Q9BXR0 403 aaKnown RBP12.95□□□□□ -0.34
LMNA-201ENST00000347559 WDFY3Q8IZQ1 3526 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 ZG16O60844 167 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 IGHV3-9P01782 118 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 FOXL2NBQ6ZUU3 175 aa12.95□□□□□ -0.34
LMNA-201ENST00000347559 ESDP10768 282 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 OR8I2Q8N0Y5 310 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 BADQ92934 168 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 DPRXA6NFQ7 191 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 K7EP13 123 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 EPHA8P29322 1005 aaPredicted RBP12.94□□□□□ -0.34
LMNA-201ENST00000347559 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 OR5A2Q8NGI9 324 aa12.94□□□□□ -0.34
LMNA-201ENST00000347559 C3orf79P0CE67 100 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 TSPOP30536 169 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 LOXL4Q96JB6 756 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 KCNIP2Q9NS61 270 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
LMNA-201ENST00000347559 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 ZFAND5O76080 213 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 CFHR1Q03591 330 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
LMNA-201ENST00000347559 PIGBOS1A0A0B4J2F0 54 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 LINC01565O15544 149 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 IGLV2-14P01704 120 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 NTF4P34130 210 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 TCL1AP56279 114 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 KLHDC1Q8N7A1 406 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 TCTEX1D1Q8N7M0 179 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 ST6GALNAC3Q8NDV1 305 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 SPOCK3Q9BQ16 436 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 DEFB126Q9BYW3 111 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 OR2H1Q9GZK4 316 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 FGF23Q9GZV9 251 aaPredicted RBP12.93□□□□□ -0.34
LMNA-201ENST00000347559 SLC35D1Q9NTN3 355 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 TMEM38BQ9NVV0 291 aa12.93□□□□□ -0.34
LMNA-201ENST00000347559 C17orf112F2Z3M2 114 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 RAMP3O60896 148 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 ARL14EPLP0DKL9 152 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 COL8A2P25067 703 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 GFRA1P56159 465 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 CEACAM16Q2WEN9 425 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 LDLRAD2Q5SZI1 272 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 C9orf135Q5VTT2 229 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 SPACA9Q96E40 222 aaPredicted RBP12.92□□□□□ -0.34
LMNA-201ENST00000347559 IGHV2OR16-5A0A0B4J2B6 119 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
LMNA-201ENST00000347559 PSG7Q13046 419 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 IGFBP7Q16270 282 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 MMD2Q8IY49 270 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 C7orf61Q8IZ16 206 aa12.92□□□□□ -0.34
LMNA-201ENST00000347559 ZNF808Q8N4W9 903 aaPredicted RBP12.92□□□□□ -0.34
LMNA-201ENST00000347559 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 A0A0J9YW62 118 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 A0A1W2PS18 150 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 OTX2P32243 289 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 ZNF83P51522 516 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 Q0VG73 95 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 STRADBQ9C0K7 418 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 EXPH5Q8NEV8 1989 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A10PA6NDY2 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A7PA6NKC0 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A23PA8MXZ1 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 VAMP5O95183 116 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms