RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TGIF2LXQ8IUE1 241 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 CMTM1Q8IZ96 169 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 MINDY2Q8NBR6 621 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 DDB2Q92466 427 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 RPEQ96AT9 228 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 GSX1Q9H4S2 264 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 NAA60Q9H7X0 242 aa15.34■□□□□ 0.05
CHMP4A-201ENST00000347519 A8MV72 311 aaPredicted RBP15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 OR4E1P0C645 316 aa15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 ZNF66Q6ZN08 573 aa15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 CCDC71LQ8N9Z2 235 aa15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 TCTEX1D2Q8WW35 142 aa15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 TP53RKQ96S44 253 aa15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 ALX4Q9H161 411 aaPredicted RBP15.33■□□□□ 0.04
CHMP4A-201ENST00000347519 IGHV3-72A0A0B4J1Y9 119 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 IGHV1-3A0A0C4DH29 117 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 GAPDHP04406 335 aaKnown RBP15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 FOSL1P15407 271 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 F2RP25116 425 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 RAG2P55895 527 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 TAS2R31P59538 309 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 SLC9A3R2Q15599 337 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 FBLN7Q53RD9 439 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 KCTD9Q7L273 389 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 NANPQ8TBE9 248 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 HSD17B10Q99714 261 aaKnown RBP15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 NUP50Q9UKX7 468 aa15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 SETD2Q9BYW2 2564 aaPredicted RBP15.32■□□□□ 0.04
CHMP4A-201ENST00000347519 TEX13DA0A0J9YY54 714 aaPredicted RBP15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 IL5P05113 134 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 OR5AC1P0C628 307 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 CEACAM3P40198 252 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 THBS3P49746 956 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 DHRS2Q13268 280 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 ZNF585BQ52M93 769 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 TMEM128Q5BJH2 165 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 Q6ZNX1 250 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 MOB3BQ86TA1 216 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 C22orf15Q8WYQ4 148 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 CFHR4Q92496 578 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 MALSU1Q96EH3 234 aa15.31■□□□□ 0.04
CHMP4A-201ENST00000347519 C3orf85A0A1B0GTC6 90 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 MDFIC2A0A1B0GVS7 189 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 C9orf170A2RU37 121 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 H0YJW9 148 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 TIMM23O14925 209 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 RAMP3O60896 148 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 SFT2D2O95562 160 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 VAMP1P23763 118 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 TMEM187Q14656 261 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 C4orf46Q504U0 113 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 CLEC9AQ6UXN8 241 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 Q71RC1 249 aaPredicted RBP15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 LYG2Q86SG7 212 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 SGPP2Q8IWX5 399 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 OR5AN1Q8NGI8 311 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 ALG5Q9Y673 324 aa15.3■□□□□ 0.04
CHMP4A-201ENST00000347519 H0Y980 276 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 FCGR3BO75015 233 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 CD24P25063 80 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 UBE2MP61081 183 aaKnown RBP15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 TATDN3Q17R31 274 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 ANKRD55Q3KP44 614 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 SPAG16Q8N0X2 631 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 LHFPL5Q8TAF8 219 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 CASTOR1Q8WTX7 329 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 GLYATL2Q8WU03 294 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 GALNT14Q96FL9 552 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 ADTRPQ96IZ2 230 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 ZFHX3Q15911 3703 aa15.29■□□□□ 0.04
CHMP4A-201ENST00000347519 A0A0A6YYJ9 748 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 A0A1B0GVG6 124 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 OOSP1A8MZH6 123 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 DHFRP00374 187 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 IGKV1-39P01597 117 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 HLA-AP01891 365 aaKnown RBP15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 IGKV1D-39P04432 117 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 S100GP29377 79 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 RAB13P51153 203 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 CATR1Q13166 79 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 DEFB112Q30KQ8 113 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 OR8H3Q8N146 312 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 MS4A7Q9GZW8 240 aaPredicted RBP15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 SLC35D1Q9NTN3 355 aa15.28■□□□□ 0.04
CHMP4A-201ENST00000347519 SONP18583 2426 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 C7orf66A4D0T2 115 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 RNF212BA8MTL3 300 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 TXNL1O43396 289 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 IFNA2P01563 188 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 UCP1P25874 307 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 HABP2Q14520 560 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 LIN54Q6MZP7 749 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 C9orf139Q6ZV77 190 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 ZNF431Q8TF32 576 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 RITA1Q96K30 269 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 MEGF9Q9H1U4 602 aa15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 LIN7CQ9NUP9 197 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-201ENST00000347519 MTORP42345 2549 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 PRAF2O60831 178 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms