RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TRBV7-9A0A0J9YWB2 115 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ATOX1O00244 68 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 DEFA4P12838 97 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PITX1P78337 314 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SLC23A3Q6PIS1 610 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 QTRT1Q9BXR0 403 aaKnown RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 OR2H1Q9GZK4 316 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 RNF186Q9NXI6 227 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 WRAP73Q9P2S5 460 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 TIMM23O14925 209 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 MST1P26927 711 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 LIPT2A6NK58 231 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 TMPRSS2O15393 492 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 DCAF4L2Q8NA75 395 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF519Q8TB69 540 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 IGLC2P0DOY2 106 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 IGLC3P0DOY3 106 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 MNX1P50219 401 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF718Q3SXZ3 478 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 YPEL4Q96NS1 127 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 LRP6O75581 1613 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 A6NNC1 897 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 GZMMP51124 257 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 TREML2Q5T2D2 321 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 H3BUT2 72 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 PLAURQ03405 335 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SRSF7Q16629 238 aaKnown RBP eCLIP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM170BQ5T4T1 132 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 INO80CQ6PI98 192 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF689Q96CS4 500 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SEMA5BQ9P283 1151 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 PRNDQ9UKY0 176 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 AMMECR1Q9Y4X0 333 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 K7ESF4 209 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CELA2BP08218 269 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ACTL10Q5JWF8 245 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 METTL27Q8N6F8 245 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 FAM231BA6NCW3 169 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 APIPQ96GX9 242 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 HCFC2Q9Y5Z7 792 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TBR1Q16650 682 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 LAT2Q9GZY6 243 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 LRP5O75197 1615 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SPG11Q96JI7 2443 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 NPSP0C0P6 89 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 RPS27LQ71UM5 84 aaKnown RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TDHQ8IZJ6 230 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 LYG1Q8N1E2 194 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 RFLNBQ8N5W9 214 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CLDN19Q8N6F1 224 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 A0A1B0GUL6 1792 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 A0A087WV48 116 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TBC1D26Q86UD7 250 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 APCDD1LQ8NCL9 501 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 HDHD3Q9BSH5 251 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SYNGR2O43760 224 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 MYBPHQ13203 477 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TCTN3Q6NUS6 607 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 OXGR1Q96P68 337 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 KLF4O43474 513 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 MS4A13Q5J8X5 152 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ASPHD2Q6ICH7 369 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 NEGR1Q7Z3B1 354 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TNFRSF13CQ96RJ3 184 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CFIP05156 583 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ACP1P24666 158 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 PSG7Q13046 419 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 CST6Q15828 149 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 DECR2Q9NUI1 292 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ARHGEF28Q8N1W1 1705 aaKnown RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 MYOFQ9NZM1 2061 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ATAD5Q96QE3 1844 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 LRRC30A6NM36 301 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SHC1P29353 583 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 MS4A18Q3C1V0 323 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SLC35E4Q6ICL7 350 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 WDR31Q8NA23 367 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 KLK11Q9UBX7 282 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 PRR36Q9H6K5 1346 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF688P0C7X2 276 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 C12orf76Q8N812 135 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SRFP11831 508 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 SLC38A11Q08AI6 406 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF788Q6ZQV5 615 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TET1Q8NFU7 2136 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 NT5CQ8TCD5 201 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 R4GN57 208 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 A0A0U1RQV1 116 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM272A0A1B0GTI8 110 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 HSPE1P61604 102 aaKnown RBP3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ERG28Q9UKR5 140 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 KIF1BO60333 1816 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 TRBV4-1A0A0J9YWV2 114 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 C17orf105B2RV13 164 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 PDE6HQ13956 83 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 C9orf57Q5W0N0 161 aa3.26□□□□□ -1.89
SYNE2-202ENST00000344113 ACSM6Q6P461 480 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms