RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TMEM200BQ69YZ2 307 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 LRRC20Q8TCA0 184 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 RNF141Q8WVD5 230 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 ARV1Q9H2C2 271 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 ANKHD1Q8IWZ3 2542 aaKnown RBP16.46■□□□□ 0.23
RTN1-202ENST00000342503 PKD1L2Q7Z442 2459 aa16.46■□□□□ 0.22
RTN1-202ENST00000342503 NDUFA2O43678 99 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 SYNGR2O43760 224 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 FCGR3BO75015 233 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 CCL3L1P16619 93 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 ERVFRD-1P60508 538 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 MIDNQ504T8 468 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 CD300LFQ8TDQ1 290 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 RAB40CQ96S21 281 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 SAA2-SAA4A0A096LPE2 208 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 I3L521 148 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 TOR1AO14656 332 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 RAB29O14966 203 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 SAA2P0DJI9 122 aaPredicted RBP16.45■□□□□ 0.22
RTN1-202ENST00000342503 IAPPP10997 89 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 RPL23AP62750 156 aaKnown RBP16.45■□□□□ 0.22
RTN1-202ENST00000342503 TOR2AQ5JU69 321 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 EIF5AL1Q6IS14 154 aaKnown RBP16.45■□□□□ 0.22
RTN1-202ENST00000342503 LYG1Q8N1E2 194 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.45■□□□□ 0.22
RTN1-202ENST00000342503 OR10A7Q8NGE5 316 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 ZNF714Q96N38 554 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 CBLN4Q9NTU7 201 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 LAMP3Q9UQV4 416 aa16.45■□□□□ 0.22
RTN1-202ENST00000342503 FBXO24O75426 580 aa16.44■□□□□ 0.22
RTN1-202ENST00000342503 AGAP20933 346 aa16.44■□□□□ 0.22
RTN1-202ENST00000342503 H2BFWTQ7Z2G1 175 aa16.44■□□□□ 0.22
RTN1-202ENST00000342503 PLA2G2EQ9NZK7 142 aa16.44■□□□□ 0.22
RTN1-202ENST00000342503 LPAR3Q9UBY5 353 aa16.44■□□□□ 0.22
RTN1-202ENST00000342503 HIVEP3Q5T1R4 2406 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 FAM90A26D6RGX4 464 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 H3BP45 60 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 TXNL1O43396 289 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 CST7O76096 145 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 HPRT1P00492 218 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 DYNLT3P51808 116 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 MRPS11P82912 194 aaKnown RBP16.43■□□□□ 0.22
RTN1-202ENST00000342503 BAXQ07812 192 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 CLINT1Q14677 625 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 C11orf71Q6IPW1 123 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 DDB2Q92466 427 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 R3HDM4Q96D70 268 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 ZNF251Q9BRH9 671 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 GINS3Q9BRX5 216 aa16.43■□□□□ 0.22
RTN1-202ENST00000342503 DAOP14920 347 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 SLC25A48Q6ZT89 311 aaKnown RBP16.42■□□□□ 0.22
RTN1-202ENST00000342503 S1PR3Q99500 378 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 RAB1BQ9H0U4 201 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 RBKSQ9H477 322 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.42■□□□□ 0.22
RTN1-202ENST00000342503 PSENENQ9NZ42 101 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 PRELID3BQ9Y3B1 194 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 WSB1Q9Y6I7 421 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 MARCH11A6NNE9 402 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 IGHV2-70P01814 119 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 SOD3P08294 240 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 KIR2DS2P43631 304 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 TMEM267Q0VDI3 215 aaPredicted RBP16.42■□□□□ 0.22
RTN1-202ENST00000342503 HEPN1Q6WQI6 88 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 HSD17B13Q7Z5P4 300 aaPredicted RBP16.42■□□□□ 0.22
RTN1-202ENST00000342503 OR1S2Q8NGQ3 325 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 OR5C1Q8NGR4 320 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 SMIM8Q96KF7 97 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 HSPB7Q9UBY9 170 aa16.42■□□□□ 0.22
RTN1-202ENST00000342503 ZNF705EA8MWA4 302 aaPredicted RBP16.41■□□□□ 0.22
RTN1-202ENST00000342503 RBFOX2O43251 390 aaKnown RBP eCLIP16.41■□□□□ 0.22
RTN1-202ENST00000342503 FGF2P09038 288 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 THBS3P49746 956 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 SULT1A2P50226 295 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 UBE2KP61086 200 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 TNFRSF9Q07011 255 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 TMEM217Q8N7C4 229 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 ZNRD1Q9P1U0 126 aa16.41■□□□□ 0.22
RTN1-202ENST00000342503 FSTL3O95633 263 aa16.4■□□□□ 0.22
RTN1-202ENST00000342503 STX12Q86Y82 276 aa16.4■□□□□ 0.22
RTN1-202ENST00000342503 MARVELD3Q96A59 401 aa16.4■□□□□ 0.22
RTN1-202ENST00000342503 C19orf84I3L1E1 186 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 MED6O75586 246 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 SULT1A1P50225 295 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 DLX6P56179 175 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 TAS2R30P59541 319 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 AVPI1Q5T686 147 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 EIF4E3Q8N5X7 224 aaKnown RBP16.39■□□□□ 0.21
RTN1-202ENST00000342503 ZNF383Q8NA42 475 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 HSD17B11Q8NBQ5 300 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 SESN1Q9Y6P5 492 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 A0A1W2PPR1 153 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 LY6HO94772 140 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 OR9G9P0C7N8 305 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 SEC11BP0C7V7 166 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 DANCRP0C864 163 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 SPP1P10451 314 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 ZNF266Q14584 549 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 TMEM155Q4W5P6 130 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 OR4S2Q8NH73 311 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms