RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 RNF122Q9H9V4 155 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 IL18BPO95998 194 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 UCP1P25874 307 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 GPX4P36969 197 aaPredicted RBP10.61□□□□□ -0.71
LMX1A-202ENST00000342310 HIST1H3AP68431 136 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 RND1Q92730 232 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 RAB40CQ96S21 281 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 PCGF1Q9BSM1 259 aa10.61□□□□□ -0.71
LMX1A-202ENST00000342310 CLDN34H7C241 214 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 AGAP20933 346 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 KLF14Q8TD94 323 aaPredicted RBP10.6□□□□□ -0.71
LMX1A-202ENST00000342310 DTD1Q8TEA8 209 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 TP53TG5Q9Y2B4 290 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 H0Y980 276 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 IGKV1-5P01602 117 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 CDX1P47902 265 aaPredicted RBP10.6□□□□□ -0.71
LMX1A-202ENST00000342310 RPL30P62888 115 aaKnown RBP10.6□□□□□ -0.71
LMX1A-202ENST00000342310 SPSB3Q6PJ21 355 aa10.6□□□□□ -0.71
LMX1A-202ENST00000342310 ZNF320A2RRD8 509 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 C12orf77C9JDV5 145 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 YKT6O15498 198 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 BCL2P10415 239 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 REG1BP48304 166 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 UCP2P55851 309 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 COL10A1Q03692 680 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 RPL39P5Q59GN2 51 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 SSX7Q7RTT5 188 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 TGIF2LXQ8IUE1 241 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 ANAPC10Q9UM13 185 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 CEP192Q8TEP8 1941 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 OR5B21A6NL26 309 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 C1QTNF9BB2RNN3 333 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 IGLV3-1P01715 115 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 ID3Q02535 119 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 FAM78BQ5VT40 261 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 TMEM42Q69YG0 159 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
LMX1A-202ENST00000342310 FAM122AQ96E09 287 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 ENY2Q9NPA8 101 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 MPC1Q9Y5U8 109 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
LMX1A-202ENST00000342310 TANC2Q9HCD6 1990 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 LYL1P12980 280 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 ERVK-16P61578 105 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 ASPHD1Q5U4P2 390 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 C16orf82Q7Z2V1 217 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 LYG1Q8N1E2 194 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 TMEM178AQ8NBL3 297 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 FDCSPQ8NFU4 85 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 OR5D13Q8NGL4 314 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 CBLN4Q9NTU7 201 aa10.59□□□□□ -0.71
LMX1A-202ENST00000342310 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 TRAV34A0A0B4J273 112 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 TMEM30CPA0ZSE6 113 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 SPINT2O43291 252 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 TOX4O94842 621 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 NAPSAO96009 420 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 DDTP30046 118 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 TCL1AP56279 114 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 FOXF2Q12947 444 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 NMSQ5H8A3 153 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 PCSK4Q6UW60 755 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 CLDND2Q8NHS1 167 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 SPRR3Q9UBC9 169 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 A0A1B0GUS0 222 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 ODAMA1E959 279 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 RNPS1Q15287 305 aaKnown RBP10.58□□□□□ -0.72
LMX1A-202ENST00000342310 ELOBQ15370 118 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 BSXQ3C1V8 233 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 OR13A1Q8NGR1 328 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 TAF15Q92804 592 aaKnown RBP eCLIP10.58□□□□□ -0.72
LMX1A-202ENST00000342310 RAB24Q969Q5 203 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 ATG2AQ2TAZ0 1938 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 DNPH1O43598 174 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 MYOD1P15172 320 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 TMEM241Q24JQ0 296 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 GPR87Q9BY21 358 aa10.58□□□□□ -0.72
LMX1A-202ENST00000342310 NAV3Q8IVL0 2385 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 IGKV1-39P01597 117 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 IGKV1D-39P04432 117 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 GALR1P47211 349 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 PAX9P55771 341 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 LHFPL4Q7Z7J7 247 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 H1FXQ92522 213 aaKnown RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 TMEM56Q96MV1 263 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 RIMS4Q9H426 269 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 KLF2Q9Y5W3 355 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 TMEM56-RWDD3S4R434 201 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 CA11O75493 328 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 NDUFB4O95168 129 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 HOXA5P20719 270 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 UCP3P55916 312 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 TMEM41BQ5BJD5 291 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 SGK494Q96LW2 274 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms