RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 OR8U9P0C7N5 309 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 LINC00205P59089 165 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 TMEM267Q0VDI3 215 aaPredicted RBP15.71■□□□□ 0.11
SYNE2-201ENST00000341472 ARL6IP1Q15041 203 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 PSG5Q15238 335 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 IGSF11Q5DX21 431 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 NR2C2APQ86WQ0 139 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 ZNF491Q8N8L2 437 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.71■□□□□ 0.11
SYNE2-201ENST00000341472 OR1N2Q8NGR9 330 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 ABHD5Q8WTS1 349 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 CLCC1Q96S66 551 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 CENPOQ9BU64 300 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 METTL1Q9UBP6 276 aaKnown RBP15.71■□□□□ 0.11
SYNE2-201ENST00000341472 ZNF230Q9UIE0 474 aaPredicted RBP15.71■□□□□ 0.11
SYNE2-201ENST00000341472 TRBV6-7A0A0A0MS04 114 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 SMIM30A4D0T7 59 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 APOA2P02652 100 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 ECSCRQ19T08 205 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 ZNF562Q6V9R5 426 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 TPRA1Q86W33 373 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 PDPNQ86YL7 162 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 OR11H1Q8NG94 326 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 RAB2BQ8WUD1 216 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 MAFIPQ8WZ33 124 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 FLYWCH2Q96CP2 140 aaKnown RBP15.7■□□□□ 0.1
SYNE2-201ENST00000341472 GNB4Q9HAV0 340 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 NUBP2Q9Y5Y2 271 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 A3GALT2U3KPV4 340 aa15.7■□□□□ 0.1
SYNE2-201ENST00000341472 LOC100506127A0A0U1RQW1 187 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 GABARAPO95166 117 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 DIRAS3O95661 229 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 IGKV1-16P04430 117 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 EGR2P11161 476 aaPredicted RBP15.69■□□□□ 0.1
SYNE2-201ENST00000341472 DGCR2P98153 550 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 NDPQ00604 133 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 SRSF7Q16629 238 aaKnown RBP eCLIP15.69■□□□□ 0.1
SYNE2-201ENST00000341472 CDNFQ49AH0 187 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 PPP1R27Q86WC6 154 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 TCTEX1D1Q8N7M0 179 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 OR5B12Q96R08 314 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 CABLES2Q9BTV7 478 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 FOXA2Q9Y261 457 aaPredicted RBP15.69■□□□□ 0.1
SYNE2-201ENST00000341472 FBXO7Q9Y3I1 522 aa15.69■□□□□ 0.1
SYNE2-201ENST00000341472 RBM7Q9Y580 266 aaKnown RBP15.69■□□□□ 0.1
SYNE2-201ENST00000341472 DPPA5A6NC42 116 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 ZNF701M0R085 212 aaPredicted RBP15.68■□□□□ 0.1
SYNE2-201ENST00000341472 CRIP2P52943 208 aaPredicted RBP15.68■□□□□ 0.1
SYNE2-201ENST00000341472 RUNX1Q01196 453 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 C9orf66Q5T8R8 295 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 GINS4Q9BRT9 223 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 SLC35D1Q9NTN3 355 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 SDHAF2Q9NX18 166 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 CEPT1Q9Y6K0 416 aa15.68■□□□□ 0.1
SYNE2-201ENST00000341472 A0A1W2PN81 502 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 CCDC160A6NGH7 325 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 SEC14L6B5MCN3 397 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 I3L521 148 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 RAMP3O60896 148 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 SPDEFO95238 335 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 CHRNA7P36544 502 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 LGALS7P47929 136 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 FHL3Q13643 280 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 AKIRIN2Q53H80 203 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 C19orf54Q5BKX5 351 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 Q6ZS49 121 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 DGCR14Q96DF8 476 aaKnown RBP15.67■□□□□ 0.1
SYNE2-201ENST00000341472 OR2D2Q9H210 308 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 DAPK2Q9UIK4 370 aa15.67■□□□□ 0.1
SYNE2-201ENST00000341472 SOX15O60248 233 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 OR8U8P0C7N1 319 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 CD40LGP29965 261 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 LUMP51884 338 aaPredicted RBP15.66■□□□□ 0.1
SYNE2-201ENST00000341472 TAGLNQ01995 201 aaKnown RBP15.66■□□□□ 0.1
SYNE2-201ENST00000341472 ZNF616Q08AN1 781 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 CTF1Q16619 201 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 ACTBL2Q562R1 376 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 UNQ5815/PRO19632Q6UWF5 114 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 ST6GALNAC5Q9BVH7 336 aa15.66■□□□□ 0.1
SYNE2-201ENST00000341472 NAA50Q9GZZ1 169 aaKnown RBP15.66■□□□□ 0.1
SYNE2-201ENST00000341472 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.66■□□□□ 0.1
SYNE2-201ENST00000341472 ELF5Q9UKW6 265 aaPredicted RBP15.66■□□□□ 0.1
SYNE2-201ENST00000341472 A6NHS1 94 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 SLC25A17O43808 307 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 CA2P00918 260 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 DTYMKP23919 212 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 SDC2P34741 201 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 LSM3P62310 102 aaKnown RBP15.65■□□□□ 0.1
SYNE2-201ENST00000341472 GNB1P62873 340 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 FXYD3Q14802 87 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 HACD4Q5VWC8 232 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 LFNGQ8NES3 379 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 CASTOR1Q8WTX7 329 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 ISOC1Q96CN7 298 aa15.65■□□□□ 0.1
SYNE2-201ENST00000341472 FAM103A1Q9BTL3 118 aaKnown RBP15.65■□□□□ 0.1
SYNE2-201ENST00000341472 RBM38Q9H0Z9 239 aaKnown RBP15.65■□□□□ 0.1
SYNE2-201ENST00000341472 RSL24D1Q9UHA3 163 aaKnown RBP15.65■□□□□ 0.1
SYNE2-201ENST00000341472 IGKV1D-8A0A087WSZ0 117 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 SCGNO76038 276 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 CNIH1O95406 144 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms