RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CT45A6P0DMU7 189 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 CT45A5P0DMU8 189 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 CT45A7P0DMV0 189 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 GNB3P16520 340 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 TALDO1P37837 337 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 DEFA1P59665 94 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 DEFA3P59666 94 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 PLA2G7Q13093 441 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 C5orf64Q2M2E5 130 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 MOGAT2Q3SYC2 334 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 CXorf66Q5JRM2 361 aaPredicted RBP10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 Q6ZS49 121 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 NR2C2APQ86WQ0 139 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR5AN1Q8NGI8 311 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR10J5Q8NHC4 309 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 CABLES2Q9BTV7 478 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR1A1Q9P1Q5 309 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 LINC00527Q9UJ94 153 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 LINC01548A6NM66 108 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 H0YJW9 148 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 IGHG4P01861 327 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 DTYMKP23919 212 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 TGFBR1P36897 503 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 PITPNAQ00169 270 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 CFHR3Q02985 330 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 ARFRP1Q13795 201 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 RPL39P5Q59GN2 51 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 SFXN4Q6P4A7 337 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 FAM131AQ6UXB0 335 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF695Q8IW36 515 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 ABHD14BQ96IU4 210 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 HSPB9Q9BQS6 159 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 PARP12Q9H0J9 701 aaKnown RBP10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 NECAP2Q9NVZ3 263 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 RDH8Q9NYR8 311 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 GAB2Q9UQC2 676 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
SIRPB3P-201ENST00000340424 TRBV6-7A0A0A0MS04 114 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 IGKV1-6A0A0C4DH72 117 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 NUDT19A8MXV4 375 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 H7C2Y5 167 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 SPDEFO95238 335 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 APOA2P02652 100 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 RPLP1P05386 114 aaKnown RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 GSTP1P09211 210 aaKnown RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 SLC2A2P11168 524 aaPredicted RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 MYCNOSP40205 109 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 CDX1P47902 265 aaPredicted RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 THBS3P49746 956 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 EIF2B2P49770 351 aaKnown RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 TAGLNQ01995 201 aaKnown RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 SPANXN2Q5MJ10 180 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF660Q6AZW8 331 aaPredicted RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 PDPNQ86YL7 162 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 LINC00482Q8N8I6 264 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 KLHL30-AS1Q8NEE0 82 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 MCRIP2Q9BUT9 160 aaKnown RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 C6orf62Q9GZU0 229 aaPredicted RBP10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR51J1Q9H342 316 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 ETV7Q9Y603 341 aa10.47□□□□□ -0.73
SIRPB3P-201ENST00000340424 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 A0A0B4J203 849 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 RRHO14718 337 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 BET1O15155 118 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 SDC2P34741 201 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 HACD4Q5VWC8 232 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 TCTEX1D1Q8N7M0 179 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 POC5Q8NA72 575 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR8U1Q8NH10 309 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 TSNAXQ99598 290 aaKnown RBP10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 SDHCQ99643 169 aaPredicted RBP10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 GINS4Q9BRT9 223 aa10.46□□□□□ -0.73
SIRPB3P-201ENST00000340424 A0A0A6YYH2 397 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 IGHV7-81A0A0B4J1V7 117 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 LOC100506127A0A0U1RQW1 187 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 A6NJ64 397 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 CTXN2P0C2S0 81 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 PSMB8P28062 276 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 CRIP2P52943 208 aaPredicted RBP10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 PLGLAQ15195 96 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 CDNFQ49AH0 187 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 IGSF11Q5DX21 431 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 ETV3LQ6ZN32 361 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 SNX29P2Q8IUI4 249 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 DPF1Q92782 380 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 RITA1Q96K30 269 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 P2RX4Q99571 388 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 RNF150Q9ULK6 438 aa10.45□□□□□ -0.74
SIRPB3P-201ENST00000340424 TGP01266 2768 aa10.44□□□□□ -0.74
SIRPB3P-201ENST00000340424 TRAV41A0A0B4J266 112 aa10.44□□□□□ -0.74
SIRPB3P-201ENST00000340424 SMIM30A4D0T7 59 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms