RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ZNF295-AS1Q8N0V1 137 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 LYG1Q8N1E2 194 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 TMEM252Q8N6L7 170 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 NUP50Q9UKX7 468 aa18.46■□□□□ 0.55
PDLIM2-203ENST00000339162 SAA2-SAA4A0A096LPE2 208 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 SAA2P0DJI9 122 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 IAPPP10997 89 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 CLINT1Q14677 625 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 NARFLQ9H6Q4 476 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 LINC00574Q9H8X3 128 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 AVPI1Q5T686 147 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 TMEM217Q8N7C4 229 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 ZNF439Q8NDP4 499 aa18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 RPUSD1Q9UJJ7 312 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-203ENST00000339162 MEF2CQ06413 473 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-203ENST00000339162 ZNF714Q96N38 554 aa18.44■□□□□ 0.54
PDLIM2-203ENST00000339162 I3L521 148 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 JTBO76095 146 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 PPOXP50336 477 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 RAB7AP51149 207 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 CBLN4Q9NTU7 201 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 ZFYVE26Q68DK2 2539 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 SYNGR2O43760 224 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 AANATQ16613 207 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 SSX9Q7RTT3 188 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 LRRC20Q8TCA0 184 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 REG4Q9BYZ8 158 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 GAL3ST2Q9H3Q3 398 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 BARX1Q9HBU1 254 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 TAS2R3Q9NYW6 316 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 KAAG1Q9UBP8 84 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 COL12A1Q99715 3063 aa18.43■□□□□ 0.54
PDLIM2-203ENST00000339162 GAPDHP04406 335 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 P0C879 139 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 MRPS11P82912 194 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 VKORC1L1Q8N0U8 176 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 ZNF251Q9BRH9 671 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 PFDN2Q9UHV9 154 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 LAMP3Q9UQV4 416 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 MARCH11A6NNE9 402 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 TCTEX1D1Q8N7M0 179 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 PLA2G2EQ9NZK7 142 aa18.42■□□□□ 0.54
PDLIM2-203ENST00000339162 ITGB1BP1O14713 200 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 RAB29O14966 203 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 FAM157CP0CG43 387 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 EIF5AP63241 154 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 TMEM267Q0VDI3 215 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 SPTAN1Q13813 2472 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 H2BFWTQ7Z2G1 175 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 UBAC2Q8NBM4 344 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 OR5C1Q8NGR4 320 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 R3HDM4Q96D70 268 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 SLC25A31Q9H0C2 315 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 MIDNQ504T8 468 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 C11orf71Q6IPW1 123 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 S1PR3Q99500 378 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 RAB1BQ9H0U4 201 aa18.41■□□□□ 0.54
PDLIM2-203ENST00000339162 LOC105371267A0A1B0GV96 52 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 MFSD2BA6NFX1 497 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 TOR1AO14656 332 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 RBMXL2O75526 392 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 MMP9P14780 707 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 DYNLT3P51808 116 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 HEPN1Q6WQI6 88 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 HSD17B11Q8NBQ5 300 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 RNF141Q8WVD5 230 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 RAB40CQ96S21 281 aa18.4■□□□□ 0.54
PDLIM2-203ENST00000339162 NDUFA2O43678 99 aa18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 DANCRP0C864 163 aa18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 UBE2KP61086 200 aa18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 SLC25A48Q6ZT89 311 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 CD300LFQ8TDQ1 290 aa18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 FAM216AQ8WUB2 273 aa18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 SH3BGRL3Q9H299 93 aa18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 FAM212BQ9NTI7 297 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-203ENST00000339162 FGF16O43320 207 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 ATG12O94817 140 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 RPL23AP62750 156 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 TNFRSF9Q07011 255 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 SPINK9Q5DT21 86 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 OR1S2Q8NGQ3 325 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 DDB2Q92466 427 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 COA4Q9NYJ1 87 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 PSENENQ9NZ42 101 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 PRELID3BQ9Y3B1 194 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 RFNGQ9Y644 331 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 TACC2O95359 2948 aa18.39■□□□□ 0.53
PDLIM2-203ENST00000339162 BORCS7-ASMTA0A0B4J1R7 106 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 ZNF705EA8MWA4 302 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 HPRT1P00492 218 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 IGHV2-70P01814 119 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 ZNF383Q8NA42 475 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 RBKSQ9H477 322 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 MED9Q9NWA0 146 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 TXNL1O43396 289 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 OR9G9P0C7N8 305 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 DAOP14920 347 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 GAB2Q9UQC2 676 aa18.38■□□□□ 0.53
PDLIM2-203ENST00000339162 WSB1Q9Y6I7 421 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms