RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 RDH5Q92781 318 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 RCC1LQ96I51 464 aaKnown RBP9.04□□□□□ -0.96
RTN3-201ENST00000338850 SSX3Q99909 188 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 RARRES2Q99969 163 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 CDH20Q9HBT6 801 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 PSENENQ9NZ42 101 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 KCNIP1Q9NZI2 227 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 CLCF1Q9UBD9 225 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 PRSS50Q9UI38 385 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 VAX2Q9UIW0 290 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 FAM215AQ9Y5M1 114 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 SPG11Q96JI7 2443 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 TRGV5A0A0B4J1U4 118 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 hCG_1809904A0A1W2PP81 198 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 A0A1W2PR64 198 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 A0A1W2PRV1 198 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 OOEPA6NGQ2 149 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 OPN1MWP04001 364 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 OPN1MW2P0DN77 364 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 OPN1MW3P0DN78 364 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 COX5AP20674 150 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 KITLGP21583 273 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 OMGP23515 440 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 CDX1P47902 265 aaPredicted RBP9.03□□□□□ -0.96
RTN3-201ENST00000338850 DLK1P80370 383 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 RUNX1Q01196 453 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
RTN3-201ENST00000338850 WDR86Q86TI4 376 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 HAPLN4Q86UW8 402 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 THNSL2Q86YJ6 484 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 C17orf78Q8N4C9 275 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 DRAM1Q8N682 238 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 ZNF610Q8N9Z0 462 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 RNASE11Q8TAA1 199 aaKnown RBP9.03□□□□□ -0.96
RTN3-201ENST00000338850 ISOC2Q96AB3 205 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 ABHD14AQ9BUJ0 271 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 TMEM147Q9BVK8 224 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 RPRMQ9NS64 109 aa9.03□□□□□ -0.96
RTN3-201ENST00000338850 PUS1Q9Y606 427 aaKnown RBP eCLIP9.03□□□□□ -0.96
RTN3-201ENST00000338850 MTORP42345 2549 aa9.02□□□□□ -0.96
RTN3-201ENST00000338850 CHD3Q12873 2000 aaKnown RBP9.02□□□□□ -0.97
RTN3-201ENST00000338850 CSMD2Q7Z408 3487 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 SEC14L6B5MCN3 397 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 CLDN34H7C241 214 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 RAB29O14966 203 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 LILRA1O75019 489 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 RHBDL1O75783 438 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 CCL2P13500 99 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 CBR1P16152 277 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 CA6P23280 308 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 TNFRSF9Q07011 255 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 HAGHQ16775 308 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 OR2T2Q6IF00 324 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 SLC25A24Q6NUK1 477 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 Q6ZRM9 215 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 CYP2G1PQ6ZSU1 146 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 FAM90A1Q86YD7 464 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
RTN3-201ENST00000338850 C1orf87Q8N0U7 546 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 TMEM217Q8N7C4 229 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.97
RTN3-201ENST00000338850 SARAFQ96BY9 339 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 DIRC2Q96SL1 478 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 NCOR1P1Q9H4R4 102 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 MANBALQ9NQG1 85 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 OR1A1Q9P1Q5 309 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 SPRR3Q9UBC9 169 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 OR14J1Q9UGF5 321 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 TRAPPC2LQ9UL33 140 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
RTN3-201ENST00000338850 INTS1Q8N201 2190 aaKnown RBP9.02□□□□□ -0.97
RTN3-201ENST00000338850 A0A0G2JNJ9 132 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 CTXND1A0A1B0GTU2 59 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 A0A1W2PPE3 182 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 A0A1W2PR80 420 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 H0YL77 283 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 ITGB1BP1O14713 200 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 HS3ST1O14792 307 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 WDR1O75083 606 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 NXPH2O95156 264 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 PTBP3O95758 552 aaKnown RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 HAND1O96004 215 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 IGKV3-15P01624 115 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 ARG1P05089 322 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 MDKP21741 143 aaPredicted RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 AKR1C3P42330 323 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 ASCL1P50553 236 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 UBE2NP61088 152 aaKnown RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 HTD2P86397 168 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 SLC38A11Q08AI6 406 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 KIAA0141Q14154 515 aaPredicted RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 PDLIM3Q53GG5 364 aaPredicted RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 C1orf185Q5T7R7 199 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 C9orf135Q5VTT2 229 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 ADAM5Q6NVV9 412 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 Q6ZT83 130 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 TGIF2LYQ8IUE0 185 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms