RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 FFAR4Q5NUL3 377 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 CST9LP1Q5W188 147 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 NCR3LG1Q68D85 454 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ZNF880Q6PDB4 577 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 HAPLN4Q86UW8 402 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 C11orf53Q8IXP5 236 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 CD177Q8N6Q3 437 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 OR4A16Q8NH70 328 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 CLDND2Q8NHS1 167 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 TAF15Q92804 592 aaKnown RBP eCLIP8.13□□□□□ -1.11
MSL3-202ENST00000337339 LSM10Q969L4 123 aaKnown RBP8.13□□□□□ -1.11
MSL3-202ENST00000337339 SCRT1Q9BWW7 348 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 WIPI2Q9Y4P8 454 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 SMG1Q96Q15 3661 aaKnown RBP8.13□□□□□ -1.11
MSL3-202ENST00000337339 IGF2RP11717 2491 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ZNF292O60281 2723 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 BTBD17A6NE02 478 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 MARCH11A6NNE9 402 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.13□□□□□ -1.11
MSL3-202ENST00000337339 ZNF737O75373 536 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 IGKV3-15P01624 115 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 HOXA1P49639 335 aaPredicted RBP8.13□□□□□ -1.11
MSL3-202ENST00000337339 SELENOVP59797 346 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 SSX7Q7RTT5 188 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ZNF295-AS1Q8N0V1 137 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 OR4F5Q8NH21 305 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ITLN1Q8WWA0 313 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 OR4F4Q96R69 305 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ASCL3Q9NQ33 180 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 ZNF71Q9NQZ8 489 aaPredicted RBP8.13□□□□□ -1.11
MSL3-202ENST00000337339 MBNL3Q9NUK0 354 aaKnown RBP8.13□□□□□ -1.11
MSL3-202ENST00000337339 ATRXP46100 2492 aa8.13□□□□□ -1.11
MSL3-202ENST00000337339 TRBV6-6A0A0A6YYG2 114 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 PIGBOS1A0A0B4J2F0 54 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 MEOX2P50222 304 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 R3HDM4Q96D70 268 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 SMIM7Q9BQ49 75 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 TMEM204Q9BSN7 226 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 SPTBN1Q01082 2364 aaKnown RBP8.12□□□□□ -1.11
MSL3-202ENST00000337339 LRRC30A6NM36 301 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 TFF3Q07654 80 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 WFDC8Q8IUA0 241 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 OR10G4Q8NGN3 311 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 OR10G9Q8NGN4 311 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 OR10G7Q8NGN6 311 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 GATAD1Q8WUU5 269 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 QTRT1Q9BXR0 403 aaKnown RBP8.12□□□□□ -1.11
MSL3-202ENST00000337339 WDR61Q9GZS3 305 aaKnown RBP8.12□□□□□ -1.11
MSL3-202ENST00000337339 K7EM74 188 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 AQP7O14520 342 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 CLDN14O95500 239 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 IGHG3P01860 377 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 BCL2P10415 239 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 NDUFB7P17568 137 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 KLF3P57682 345 aaPredicted RBP8.12□□□□□ -1.11
MSL3-202ENST00000337339 ERVFRD-1P60508 538 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 ERVK-16P61578 105 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 CCL8P80075 99 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 LYG1Q8N1E2 194 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 PPP1R35Q8TAP8 253 aa8.12□□□□□ -1.11
MSL3-202ENST00000337339 PATZ1Q9HBE1 687 aaKnown RBP8.12□□□□□ -1.11
MSL3-202ENST00000337339 CYB5R3P00387 301 aaPredicted RBP8.11□□□□□ -1.11
MSL3-202ENST00000337339 SLC35E4Q6ICL7 350 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 RPP25LQ8N5L8 163 aaKnown RBP8.11□□□□□ -1.11
MSL3-202ENST00000337339 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 A0A0U1RQK1 487 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 TNFSF13O75888 250 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 IFNA1P01562 189 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 HNF1AP20823 631 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 GCSAMLQ5JQS6 135 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 DUX4L9Q6RFH8 374 aaPredicted RBP8.11□□□□□ -1.11
MSL3-202ENST00000337339 ABHD12Q8N2K0 398 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 C5orf30Q96GV9 206 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 DKK4Q9UBT3 224 aa8.11□□□□□ -1.11
MSL3-202ENST00000337339 A0A1W2PPV4 95 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 AHRRA9YTQ3 701 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
MSL3-202ENST00000337339 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 Q8WTZ3 238 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 S1PR3Q99500 378 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 CCL13Q99616 98 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 YLPM1P49750 1951 aaKnown RBP8.1□□□□□ -1.11
MSL3-202ENST00000337339 TRAV38-1A0A0B4J264 116 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 ZNF891A8MT65 544 aaPredicted RBP8.1□□□□□ -1.11
MSL3-202ENST00000337339 J3QW42 95 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 TRGC2P03986 189 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 ACAA1P09110 424 aaPredicted RBP8.1□□□□□ -1.11
MSL3-202ENST00000337339 CXCL1P09341 107 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 CD82P27701 267 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 PSMB3P49720 205 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 PDLIM3Q53GG5 364 aaPredicted RBP8.1□□□□□ -1.11
MSL3-202ENST00000337339 TMEM41BQ5BJD5 291 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 UTF1Q5T230 341 aa8.1□□□□□ -1.11
MSL3-202ENST00000337339 WDR25Q64LD2 544 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms