RNA–Protein interactions for RNA: ENST00000331536.7

CROT-201, Transcript of carnitine O-octanoyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CROT, Length 3,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-201ENST00000331536 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 FAM168AQ92567 244 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.418e-7■■■□□ 19
CROT-201ENST00000331536 hCG_1809904A0A1W2PP81 198 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 A0A1W2PR64 198 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 A0A1W2PRV1 198 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 SSSCA1O60232 199 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 S100A11P31949 105 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 PDLIM4P50479 330 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 CAV2P51636 162 aa12.5□□□□□ -0.41
CROT-201ENST00000331536 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
CROT-201ENST00000331536 HMSDA8MTL9 139 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 Q6ZRM9 215 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 PLA2G2AP14555 144 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 SRSF4Q08170 494 aaKnown RBP12.49□□□□□ -0.41
CROT-201ENST00000331536 DIAPH2-AS1Q14236 149 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 PRSS54Q6PEW0 395 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 CLEC2AQ6UVW9 174 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 PAIP2BQ9ULR5 123 aaKnown RBP12.49□□□□□ -0.41
CROT-201ENST00000331536 MSGN1A6NI15 193 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 J3QR06 171 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 GPR37O15354 613 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 SPDEFO95238 335 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 C4BPBP20851 252 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 NMSQ5H8A3 153 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 ZNF439Q8NDP4 499 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
CROT-201ENST00000331536 TMEM133Q9H2Q1 129 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
CROT-201ENST00000331536 RCL1Q9Y2P8 373 aaKnown RBP12.49□□□□□ -0.41
CROT-201ENST00000331536 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
CROT-201ENST00000331536 IGHV3-72A0A0B4J1Y9 119 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 H3BP45 60 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 K7EPK0 472 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 VAMP2P63027 116 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 PNKDQ8N490 385 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 OR9G1Q8NH87 305 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 CLDND2Q8NHS1 167 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 R3HDM4Q96D70 268 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 KANTRA0A1W2PQU2 76 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 F5H0A9 414 aaPredicted RBP12.48□□□□□ -0.41
CROT-201ENST00000331536 ACOT7LQ6ZUV0 252 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 ZNF295-AS1Q8N0V1 137 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 SESN1Q9Y6P5 492 aa12.48□□□□□ -0.41
CROT-201ENST00000331536 NOTCH2Q04721 2471 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 B3GALNT1O75752 331 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 PCGF1Q9BSM1 259 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 MARCH11A6NNE9 402 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 IAPPP10997 89 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 SLC25A4P12235 298 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 ZFP36P26651 326 aaKnown RBP12.47□□□□□ -0.41
CROT-201ENST00000331536 DLX6P56179 175 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 ERVK-16P61578 105 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 C11orf42Q8N5U0 333 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 ZNF383Q8NA42 475 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 PCNPQ8WW12 178 aaKnown RBP12.47□□□□□ -0.41
CROT-201ENST00000331536 MRPL20Q9BYC9 149 aaKnown RBP12.47□□□□□ -0.41
CROT-201ENST00000331536 SLC35D1Q9NTN3 355 aa12.47□□□□□ -0.41
CROT-201ENST00000331536 RNF222A6NCQ9 220 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 ENSAO43768 121 aaKnown RBP12.46□□□□□ -0.41
CROT-201ENST00000331536 OR2F2O95006 317 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 GOSR1O95249 250 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 KRTAP10-9P60411 292 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 KLRD1Q13241 179 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 IL15RAQ13261 267 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 OR10A7Q8NGE5 316 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 CD300LFQ8TDQ1 290 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 PIMREGQ9BSJ6 248 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 MMP26Q9NRE1 261 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 IGHV2-26A0A0B4J1V2 119 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 DEDDO75618 318 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 FSTL3O95633 263 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 PVALBP20472 110 aaPredicted RBP12.46□□□□□ -0.41
CROT-201ENST00000331536 PAX6P26367 422 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 OR2B8PP59922 312 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
CROT-201ENST00000331536 ATG12O94817 140 aa12.46□□□□□ -0.42
CROT-201ENST00000331536 IGHV2-5P01817 119 aa12.46□□□□□ -0.42
CROT-201ENST00000331536 THBS3P49746 956 aa12.46□□□□□ -0.42
CROT-201ENST00000331536 TMEM65Q6PI78 240 aa12.46□□□□□ -0.42
CROT-201ENST00000331536 TGIF2LXQ8IUE1 241 aa12.46□□□□□ -0.42
CROT-201ENST00000331536 CLEC7AQ9BXN2 247 aa12.46□□□□□ -0.42
CROT-201ENST00000331536 ABCA1O95477 2261 aa12.45□□□□□ -0.42
CROT-201ENST00000331536 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
CROT-201ENST00000331536 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
CROT-201ENST00000331536 CHST1O43916 411 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms