RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 AARDQ4LEZ3 155 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 CDPF1Q6NVV7 123 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 FAM180AQ6UWF9 173 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 OR51G1Q8NGK1 321 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 PFDN5Q99471 154 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 HSD17B10Q99714 261 aaKnown RBP18.85■□□□□ 0.61
HOXD1-201ENST00000331462 PARLQ9H300 379 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 LYZL6O75951 148 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 ARG2P78540 354 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 FAM53AQ6NSI3 398 aaPredicted RBP18.84■□□□□ 0.61
HOXD1-201ENST00000331462 Q6ZR03 302 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 H2BFWTQ7Z2G1 175 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 OR4X1Q8NH49 305 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 DMDP11532 3685 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 LY86O95711 162 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 SOX8P57073 446 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 TFF3Q07654 80 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 TMEM249Q2WGJ8 235 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 WDR82Q6UXN9 313 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 ZNF826PQ6ZT77 177 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 FAM214BQ7L5A3 538 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 MRGPRDQ8TDS7 321 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 ZDHHC16Q969W1 377 aa18.84■□□□□ 0.61
HOXD1-201ENST00000331462 VENTXO95231 258 aa18.83■□□□□ 0.61
HOXD1-201ENST00000331462 KITLGP21583 273 aa18.83■□□□□ 0.61
HOXD1-201ENST00000331462 COA6Q5JTJ3 125 aaKnown RBP18.83■□□□□ 0.61
HOXD1-201ENST00000331462 TRAT1Q6PIZ9 186 aa18.83■□□□□ 0.61
HOXD1-201ENST00000331462 C1orf162Q8NEQ5 155 aaPredicted RBP18.83■□□□□ 0.61
HOXD1-201ENST00000331462 FAM216AQ8WUB2 273 aa18.83■□□□□ 0.61
HOXD1-201ENST00000331462 RAB24Q969Q5 203 aa18.83■□□□□ 0.61
HOXD1-201ENST00000331462 RPUSD4Q96CM3 377 aaKnown RBP18.83■□□□□ 0.61
HOXD1-201ENST00000331462 GFOD1Q9NXC2 390 aa18.83■□□□□ 0.61
HOXD1-201ENST00000331462 ZDBF2Q9HCK1 2354 aa18.83■□□□□ 0.6
HOXD1-201ENST00000331462 C17orf112F2Z3M2 114 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 H7BYZ3 331 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 SOX15O60248 233 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 IGHG3P01860 377 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 GABRA2P47869 451 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 PLA2G2CQ5R387 149 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 TMEM183AQ8IXX5 376 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 ZNF709Q8N972 641 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 SNX22Q96L94 193 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 HIST1H2BLQ99880 126 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 TECTAO75443 2155 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 SMCO3A2RU48 225 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 FABP4P15090 132 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 HTD2P86397 168 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 C4orf17Q53FE4 359 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 PDZD11Q5EBL8 140 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 BTNL3Q6UXE8 466 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 ANAPC16Q96DE5 110 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 NEIL1Q96FI4 390 aaPredicted RBP18.82■□□□□ 0.6
HOXD1-201ENST00000331462 LOXL4Q96JB6 756 aa18.82■□□□□ 0.6
HOXD1-201ENST00000331462 A0A1B0GWJ7 208 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 FAM90A9PA6NNJ1 464 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 LINC00473A8K010 186 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 HRASP01112 189 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 SMIM21Q3B7S5 101 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 Q8N7P7 452 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 LINC00469Q8N7U9 141 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 OR13A1Q8NGR1 328 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 OR4F5Q8NH21 305 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 PACRGQ96M98 296 aaPredicted RBP18.81■□□□□ 0.6
HOXD1-201ENST00000331462 OR5B12Q96R08 314 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 OR4F4Q96R69 305 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 MARCH11A6NNE9 402 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 C15orf62A8K5M9 175 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 CDX4O14627 284 aaPredicted RBP18.81■□□□□ 0.6
HOXD1-201ENST00000331462 ADH4P08319 380 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 SSTR5P35346 364 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 GALR1P47211 349 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 KIAA2026Q5HYC2 2103 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 CXorf67Q86X51 503 aaPredicted RBP18.81■□□□□ 0.6
HOXD1-201ENST00000331462 WDR83OSQ9Y284 106 aa18.81■□□□□ 0.6
HOXD1-201ENST00000331462 FAM186AA6NE01 2351 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 C15orf65H3BRN8 121 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 HMGB3O15347 200 aaKnown RBP18.8■□□□□ 0.6
HOXD1-201ENST00000331462 TNFSF10P50591 281 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 COL10A1Q03692 680 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 ACOT6Q3I5F7 207 aaPredicted RBP18.8■□□□□ 0.6
HOXD1-201ENST00000331462 C9orf152Q5JTZ5 239 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 GCNT2Q8N0V5 402 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 RNASEH2CQ8TDP1 164 aaKnown RBP18.8■□□□□ 0.6
HOXD1-201ENST00000331462 RAB1CQ92928 201 aa18.8■□□□□ 0.6
HOXD1-201ENST00000331462 FAM3BP58499 235 aaPredicted RBP18.79■□□□□ 0.6
HOXD1-201ENST00000331462 Q3ZCU0 254 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 ATP1A1-AS1Q5TC04 95 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 OR5R1Q8NH85 324 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 GATAD1Q8WUU5 269 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 WASF3Q9UPY6 502 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 GGCTO75223 188 aaKnown RBP18.79■□□□□ 0.6
HOXD1-201ENST00000331462 TYMSP04818 313 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 PLA2G5P39877 138 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 CDC34P49427 236 aaPredicted RBP18.79■□□□□ 0.6
HOXD1-201ENST00000331462 HNF4GQ14541 408 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 HES3Q5TGS1 186 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 PRAMEF6Q5VXH4 476 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 METRNQ9UJH8 293 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 GAB2Q9UQC2 676 aa18.79■□□□□ 0.6
HOXD1-201ENST00000331462 USF3Q68DE3 2245 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms