RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 JPT1Q9UK76 154 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 PKD1P98161 4303 aa11.21□□□□□ -0.62
CTHRC1-201ENST00000330295 IGHV3-43A0A0B4J1X8 118 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 NOTOA8MTQ0 251 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 TXNL1O43396 289 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 IGHV3-43DP0DP04 118 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 RAB6AP20340 208 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 SOX6P35712 828 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 HTD2P86397 168 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 ARL6IP1Q15041 203 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 TSPAN14Q8NG11 270 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 KCNK15Q9H427 330 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 C12orf4Q9NQ89 552 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 WSB1Q9Y6I7 421 aa11.2□□□□□ -0.62
CTHRC1-201ENST00000330295 A0A0J9YWU9 116 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 TMEM272A0A1B0GTI8 110 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 A0A1W2PPE3 182 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 HSD17B6O14756 317 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 SOCS1O15524 211 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 LGALS1P09382 135 aaKnown RBP11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 CD3GP09693 182 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 CD36P16671 472 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 OR10A3P58181 314 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 ZNF816Q0VGE8 651 aaPredicted RBP11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 OR10V1Q8NGI7 309 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 PTX4Q96A99 478 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 RAB3CQ96E17 227 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 S1PR3Q99500 378 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 CMSS1Q9BQ75 279 aaKnown RBP11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 CENPOQ9BU64 300 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 PLSCR3Q9NRY6 295 aa11.19□□□□□ -0.62
CTHRC1-201ENST00000330295 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 LOC100506127A0A0U1RQW1 187 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 PRSS29PA6NIE9 313 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 G3V318 75 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 YPEL1O60688 119 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 SCGNO76038 276 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 NAPSAO96009 420 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 HMGN3Q15651 99 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 SLC25A48Q6ZT89 311 aaKnown RBP11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 OR2AK2Q8NG84 335 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 OR2T10Q8NGZ9 312 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 FLYWCH2Q96CP2 140 aaKnown RBP11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 YPEL2Q96QA6 119 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 AK3Q9UIJ7 227 aa11.18□□□□□ -0.62
CTHRC1-201ENST00000330295 A0A0A6YYD4 124 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 TPPPO94811 219 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 HSPB1P04792 205 aaKnown RBP11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 TALDO1P37837 337 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 MORN2Q502X0 79 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 LY6G6FQ5SQ64 297 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 OR52L2PQ8NGH6 319 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 OR10R2Q8NGX6 335 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 ABHD14AQ9BUJ0 271 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 PECRQ9BY49 303 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 ATG5Q9H1Y0 275 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 OR51E2Q9H255 320 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 DAPK2Q9UIK4 370 aa11.17□□□□□ -0.62
CTHRC1-201ENST00000330295 J3QL48 77 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 TMEM127O75204 238 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 ZBTB25P24278 435 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 CD1BP29016 333 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 SDC2P34741 201 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 PPP1CCP36873 323 aaKnown RBP11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 REG1BP48304 166 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 CD81P60033 236 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 CT45A1Q5HYN5 189 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 LCN12Q6JVE5 192 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 CT45A3Q8NHU0 189 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 ZNF107Q9UII5 783 aaPredicted RBP11.16□□□□□ -0.62
CTHRC1-201ENST00000330295 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 LANCL1O43813 399 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 TFAP2AP05549 437 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 SERPINB10P48595 397 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 ZNF137PP52743 207 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 TMEM50BP56557 158 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 SCAND1P57086 179 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 HLA-DRB3P79483 266 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 ARFRP1Q13795 201 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 SFXN4Q6P4A7 337 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 ZNF880Q6PDB4 577 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 DEFB125Q8N687 156 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 ZNF439Q8NDP4 499 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 OR8H1Q8NGG4 311 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 SRD5A3Q9H8P0 318 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms