RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MYOZ3Q8TDC0 251 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 RAB37Q96AX2 223 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 CHODLQ9H9P2 273 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 MRPL16Q9NX20 251 aaKnown RBP6.13□□□□□ -1.43
SMC1A-201ENST00000322213 COX11Q9Y6N1 276 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 MPZL1O95297 269 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 SELENOTP62341 195 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 OR4C3Q8NH37 302 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 COX14Q96I36 57 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 LANCL2Q9NS86 450 aa6.13□□□□□ -1.43
SMC1A-201ENST00000322213 SHISA3A0PJX4 238 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 DEFB133Q30KQ1 61 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 LRRC75AQ8NAA5 344 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 NAT6Q93015 286 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 SPANXA1Q9NS26 97 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 SLC7A10Q9NS82 523 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 A0A1W2PNR3 127 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 RBM11P57052 281 aaKnown RBP6.12□□□□□ -1.43
SMC1A-201ENST00000322213 FOXF1Q12946 379 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 ZIC1Q15915 447 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 GNB1LQ9BYB4 327 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 LINC00869P0C866 280 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 CA6P23280 308 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 MRPS21P82921 87 aaKnown RBP6.12□□□□□ -1.43
SMC1A-201ENST00000322213 AP5S1Q9NUS5 200 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 THAP10Q9P2Z0 257 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-201ENST00000322213 HBZP02008 142 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 SEC11AP67812 179 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 SSPNQ14714 243 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 MARS2Q96GW9 593 aaKnown RBP6.12□□□□□ -1.43
SMC1A-201ENST00000322213 FOXD3Q9UJU5 478 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-201ENST00000322213 A1L4Q6 167 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 CYB561P49447 251 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 RNF126Q9BV68 326 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 PRRT4C9JH25 899 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 M0R296 226 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 IGHMP01871 453 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 TMEM187Q14656 261 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 PNKDQ8N490 385 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 OR10G3Q8NGC4 313 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 WBP1LQ9NX94 342 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 TRBV24-1A0A075B6N3 115 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 FTH1P19P0C7X4 201 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 C10orf113Q5VZT2 155 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 CALHM1Q8IU99 346 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 MMD2Q8IY49 270 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 OR2M3Q8NG83 312 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 SLC25A28Q96A46 364 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 ANAPC13Q9BS18 74 aa6.12□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF324O75467 553 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 IFI6P09912 130 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 CCL5P13501 91 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 ADCYAP1P18509 176 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 GCSHP23434 173 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 TFPI2P48307 235 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 HBBP68871 147 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 EIF4EBP2Q13542 120 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 TMEM252Q8N6L7 170 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 WBP2Q969T9 261 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 RPEQ96AT9 228 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 SARGQ9BW04 601 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 SOX21Q9Y651 276 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 IGHV3-15A0A0B4J1V0 119 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 LOC107984156A0A0G2JMH3 177 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 A0A1W2PQD3 144 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 SERF1AO75920 110 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF324BQ6AW86 544 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 ARL17AQ8IVW1 177 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF645Q8N7E2 425 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 UBTD1Q9HAC8 227 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 A0A1W2PPE3 182 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 GNG7O60262 68 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 PSMG4Q5JS54 123 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 SEPSECSQ9HD40 501 aaKnown RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 PXMP4Q9Y6I8 212 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 CD46P15529 392 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 DMRTC2Q8IXT2 367 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 A0A096LPE4 126 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 TRAV1-1A0A0B4J248 108 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 ADRA2AP08913 450 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 OR4A8P0C604 315 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 PRDX4Q13162 271 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 C19orf24Q9BVV8 132 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 CST9LQ9H4G1 147 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 FGF22Q9HCT0 170 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 TRAV9-2A0A087WT02 112 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 NPY1RP25929 384 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 RPS19BP1Q86WX3 136 aaKnown RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 MRPL43Q8N983 215 aaKnown RBP6.11□□□□□ -1.43
SMC1A-201ENST00000322213 TMEM116Q8NCL8 245 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 EGLN1Q9GZT9 426 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 IL36BQ9NZH7 164 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 UFC1Q9Y3C8 167 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 CCDC168Q8NDH2 2452 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 TRBV6-7A0A0A0MS04 114 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 RPL36A-HNRNPH2H7BZ11 118 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 KLF4O43474 513 aa6.11□□□□□ -1.43
SMC1A-201ENST00000322213 HCSTQ9UBK5 93 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms