RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ACTBL2Q562R1 376 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 C22orf42Q6IC83 251 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 ZNF383Q8NA42 475 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 SLC35D1Q9NTN3 355 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 RBM7Q9Y580 266 aaKnown RBP13.8□□□□□ -0.2
TPM1-203ENST00000317516 A0A075B6Q4 140 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 IGKV1-16P04430 117 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 GSTT2P0CG29 244 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 GSTT2BP0CG30 244 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 LGALS7P47929 136 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 SRSF7Q16629 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPM1-203ENST00000317516 C19orf54Q5BKX5 351 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 GINS4Q9BRT9 223 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 CABLES2Q9BTV7 478 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 YTHDF1Q9BYJ9 559 aaKnown RBP13.79□□□□□ -0.2
TPM1-203ENST00000317516 ATG5Q9H1Y0 275 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 SCOCQ9UIL1 159 aa13.79□□□□□ -0.2
TPM1-203ENST00000317516 TRBV6-7A0A0A0MS04 114 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 SHISA3A0PJX4 238 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 MFNGO00587 321 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 SOX15O60248 233 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 CA2P00918 260 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
TPM1-203ENST00000317516 PSMB9P28065 219 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 GNB1P62873 340 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 IGSF11Q5DX21 431 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 UBE2UQ5VVX9 321 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 LFNGQ8NES3 379 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 OR2D2Q9H210 308 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 SLA2Q9H6Q3 261 aa13.78□□□□□ -0.2
TPM1-203ENST00000317516 NOTOA8MTQ0 251 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 LINC01619G3V211 115 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 OVOL1O14753 267 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 SLC25A17O43808 307 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 CNIH1O95406 144 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 RRASP10301 218 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 FGF9P31371 208 aaPredicted RBP13.77□□□□□ -0.21
TPM1-203ENST00000317516 LINC00205P59089 165 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 FXYD3Q14802 87 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 Q6ZS49 121 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 TPRA1Q86W33 373 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 SPARTQ8N0X7 666 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 ARPC1AQ92747 370 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 FAM103A1Q9BTL3 118 aaKnown RBP13.77□□□□□ -0.21
TPM1-203ENST00000317516 SDHAF2Q9NX18 166 aa13.77□□□□□ -0.21
TPM1-203ENST00000317516 ZNF230Q9UIE0 474 aaPredicted RBP13.77□□□□□ -0.21
TPM1-203ENST00000317516 ARPC1BO15143 372 aaKnown RBP13.76□□□□□ -0.21
TPM1-203ENST00000317516 LGALS1P09382 135 aaKnown RBP13.76□□□□□ -0.21
TPM1-203ENST00000317516 NHLRC4P0CG21 123 aaPredicted RBP13.76□□□□□ -0.21
TPM1-203ENST00000317516 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
TPM1-203ENST00000317516 DCUN1D4Q92564 292 aa13.76□□□□□ -0.21
TPM1-203ENST00000317516 ADTRPQ96IZ2 230 aa13.76□□□□□ -0.21
TPM1-203ENST00000317516 TMEM68Q96MH6 324 aa13.76□□□□□ -0.21
TPM1-203ENST00000317516 TXNL4BQ9NX01 149 aaKnown RBP13.76□□□□□ -0.21
TPM1-203ENST00000317516 STUB1Q9UNE7 303 aa13.76□□□□□ -0.21
TPM1-203ENST00000317516 SSR3Q9UNL2 185 aa13.76□□□□□ -0.21
TPM1-203ENST00000317516 ZNF256Q9Y2P7 627 aaPredicted RBP13.76□□□□□ -0.21
TPM1-203ENST00000317516 A0A0B4J203 849 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 SCGNO76038 276 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 HSPB1P04792 205 aaKnown RBP13.75□□□□□ -0.21
TPM1-203ENST00000317516 CTXN2P0C2S0 81 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 DTYMKP23919 212 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 TPPP2P59282 170 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 ASPHD1Q5U4P2 390 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 CASTOR1Q8WTX7 329 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 MAFIPQ8WZ33 124 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 MS4A10Q96PG2 267 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 PRR25Q96S07 402 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.75□□□□□ -0.21
TPM1-203ENST00000317516 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
TPM1-203ENST00000317516 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
TPM1-203ENST00000317516 H3BUA1 57 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 SHOXO15266 292 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 TRGV3P03979 118 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 PITPNAQ00169 270 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 NR2C2APQ86WQ0 139 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
TPM1-203ENST00000317516 RHOVQ96L33 236 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 HARBI1Q96MB7 349 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 ST6GALNAC5Q9BVH7 336 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 ALX4Q9H161 411 aaPredicted RBP13.74□□□□□ -0.21
TPM1-203ENST00000317516 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 DNAH3Q8TD57 4116 aa13.74□□□□□ -0.21
TPM1-203ENST00000317516 A0A0G2JLM5 398 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 SAP30O75446 220 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 LY86O95711 162 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 TMEM177Q53S58 311 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 HACD4Q5VWC8 232 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 H1FOOQ8IZA3 346 aaPredicted RBP13.73□□□□□ -0.21
TPM1-203ENST00000317516 BVESQ8NE79 360 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 DAPK2Q9UIK4 370 aa13.73□□□□□ -0.21
TPM1-203ENST00000317516 IGHV4OR15-8A0A075B7B6 117 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms