RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 TMEM56Q96MV1 263 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 TMEM56-RWDD3S4R434 201 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 FGF16O43320 207 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 LILRA1O75019 489 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 GYPAP02724 150 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 BCL2P10415 239 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 RAB4AP20338 218 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 CTAG1AP78358 180 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 SRSF4Q08170 494 aaKnown RBP11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 TXN2Q99757 166 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 ABHD14AQ9BUJ0 271 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 SMDT1Q9H4I9 107 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 SH2D2AQ9NP31 389 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 SS18L1O75177 396 aaPredicted RBP11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 PGA5P0DJD9 388 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 THBS3P49746 956 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNF90Q03938 601 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 ACSF3Q4G176 576 aaPredicted RBP11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 SLC35E4Q6ICL7 350 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 ACP7Q6ZNF0 438 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 MDS2Q8NDY4 140 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 RND1Q92730 232 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 TAF15Q92804 592 aaKnown RBP eCLIP11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 A0A1B0GV90 55 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 IQCF6A8MYZ5 107 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 HPRT1P00492 218 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 LGALS4P56470 323 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 HFEQ30201 348 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 TIGITQ495A1 244 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNRF1Q8ND25 227 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 LEAP2Q969E1 77 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 RHOVQ96L33 236 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 GSN-AS1Q9NRJ2 163 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 CTXND1A0A1B0GTU2 59 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 ZG16O60844 167 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 DKK1O94907 266 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 CHRNA7P36544 502 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 BSXQ3C1V8 233 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 VMA21Q3ZAQ7 101 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 FREM1Q5H8C1 2179 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNF320A2RRD8 509 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 MARCH11A6NNE9 402 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 PAGE4O60829 102 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 KRTCAP3Q53RY4 240 aa11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 PEAR1Q5VY43 1037 aaPredicted RBP11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 ZFHX2Q9C0A1 2572 aaPredicted RBP11.35□□□□□ -0.59
PCDHB9-201ENST00000316105 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 RPL29P47914 159 aaKnown RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 RPL31P62899 125 aaKnown RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 BSCL2Q96G97 398 aaPredicted RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 DCTN5Q9BTE1 182 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CARHSP1Q9Y2V2 147 aaKnown RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 TFF1P04155 84 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 SRSF6Q13247 344 aaKnown RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CALYQ9NYX4 217 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 FAM90A26D6RGX4 464 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CT45A6P0DMU7 189 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CT45A5P0DMU8 189 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CT45A7P0DMV0 189 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 NPY1RP25929 384 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 RHOBP62745 196 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CT45A1Q5HYN5 189 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CYB5R2Q6BCY4 276 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 LRTM2Q8N967 370 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 C1orf162Q8NEQ5 155 aaPredicted RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 CT45A3Q8NHU0 189 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 RAB29O14966 203 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 OPRK1P41145 380 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 GALR1P47211 349 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 TCTEX1D1Q8N7M0 179 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 GTF3AQ92664 365 aaKnown RBP11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 MANBALQ9NQG1 85 aa11.34□□□□□ -0.59
PCDHB9-201ENST00000316105 COX7A2P2O60397 106 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 CYB5R3P00387 301 aaPredicted RBP11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 CD1BP29016 333 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 OR13A1Q8NGR1 328 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 CEACAM18A8MTB9 384 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 SEC14L6B5MCN3 397 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 DNASE2O00115 360 aaPredicted RBP11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 NAPSAO96009 420 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 CD3EP07766 207 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 FBP1P09467 338 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 RNF224P0DH78 156 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 ANOS1P23352 680 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 RPRMQ9NS64 109 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 MKI67P46013 3256 aaKnown RBP11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 CREBBPQ92793 2442 aa11.33□□□□□ -0.6
PCDHB9-201ENST00000316105 YIF1AO95070 293 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms