RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 EIF4EBP1Q13541 118 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 LYPD2Q6UXB3 125 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 JPT1Q9UK76 154 aa18.57■□□□□ 0.56
PDLIM2-202ENST00000308354 IGSF10Q6WRI0 2623 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 TRGV10A0A0A0MS01 117 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 F2RL2O00254 374 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 DYNLT3P51808 116 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 ERVFRD-1P60508 538 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF816Q0VGE8 651 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 FAM234AQ9H0X4 552 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 RALYQ9UKM9 306 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 RFNGQ9Y644 331 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 DSCAML1Q8TD84 2053 aa18.56■□□□□ 0.56
PDLIM2-202ENST00000308354 NKX6-3A6NJ46 265 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 BRWD1-AS2P59051 145 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF266Q14584 549 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 ZBTB34Q8NCN2 500 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 TCTEX1D2Q8WW35 142 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 SLC25A10Q9UBX3 287 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 IGHV1-69-2A0A0G2JMI3 117 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 KBTBD11-OT1A0A1B0GTJ5 212 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 LINC00473A8K010 186 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 C17orf98A8MV24 154 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 SLC31A2O15432 143 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 NFYBP25208 207 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 CLN8Q9UBY8 286 aa18.55■□□□□ 0.56
PDLIM2-202ENST00000308354 PROP1O75360 226 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 MMP23AO75900 390 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 ATG12O94817 140 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 CLDN1O95832 211 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 BAXQ07812 192 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF616Q08AN1 781 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 EDARADDQ8WWZ3 215 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 UQCC1Q9NVA1 299 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 YPEL1O60688 119 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 GPR12P47775 334 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 TMEM182Q6ZP80 229 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 SPAG16Q8N0X2 631 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 LYPD6BQ8NI32 183 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 YPEL2Q96QA6 119 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 TSNAXQ99598 290 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 CACFD1Q9UGQ2 172 aa18.54■□□□□ 0.56
PDLIM2-202ENST00000308354 NUPL2O15504 423 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 RPL39P5Q59GN2 51 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 RAB40CQ96S21 281 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 C19orf12Q9NSK7 152 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 HCFC1P51610 2035 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 TANC2Q9HCD6 1990 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 F8W036 122 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 KRASP01116 189 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 PRH1P02810 166 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 IAPPP10997 89 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 ATP6V0CP27449 155 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 CAMLGP49069 296 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 TMEM267Q0VDI3 215 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 GUCA2BQ16661 112 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 MIDNQ504T8 468 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 TMEM204Q9BSN7 226 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 NCOR1P1Q9H4R4 102 aa18.53■□□□□ 0.56
PDLIM2-202ENST00000308354 YLPM1P49750 1951 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 DOCK11Q5JSL3 2073 aa18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 SYNGR2O43760 224 aa18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 COL8A2P25067 703 aa18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 PLA2G5P39877 138 aa18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 RPL23AP62750 156 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 CATR1Q13166 79 aa18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 ZNF273Q14593 569 aa18.52■□□□□ 0.56
PDLIM2-202ENST00000308354 TXNL1O43396 289 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 S1PR2O95136 353 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 G6PCP35575 357 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 PRAMEF5Q5TYX0 476 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 C1orf229Q6ZS94 237 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 STX12Q86Y82 276 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 IFI27L2Q9H2X8 130 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 GFOD1Q9NXC2 390 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 CTSZQ9UBR2 303 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 WSB1Q9Y6I7 421 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 HFEQ30201 348 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 C4orf17Q53FE4 359 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 H1FXQ92522 213 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 NKX6-2Q9C056 277 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 MMP24Q9Y5R2 645 aa18.51■□□□□ 0.55
PDLIM2-202ENST00000308354 RNASEK-C17orf49H0YIS7 233 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 TSPAN15O95858 294 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 GNG10P50151 68 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 RPL31P62899 125 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 CT45A1Q5HYN5 189 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 C10orf91Q5T1B1 145 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 NCR3LG1Q68D85 454 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 OR2G3Q8NGZ4 309 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 CT45A3Q8NHU0 189 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 ITLN2Q8WWU7 325 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 TSPAN4O14817 238 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 TNFRSF13BO14836 293 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 LY6HO94772 140 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 CCL3L1P16619 93 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 SULT1A1P50225 295 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 RAB5CP51148 216 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 PUSL1Q8N0Z8 303 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 ATP5SQ99766 215 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms