RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SFXN4Q6P4A7 337 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 OR11H1Q8NG94 326 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 LGALS14Q8TCE9 139 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 ST6GALNAC5Q9BVH7 336 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 RNF167Q9H6Y7 350 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 SDHAF2Q9NX18 166 aa13.28□□□□□ -0.28
HMGCLL1-202ENST00000308161 IGKV1D-8A0A087WSZ0 117 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 SLC25A17O43808 307 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 CLEC2LP0C7M8 214 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 SDC2P34741 201 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 RAB9AP51151 201 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 EGFEM1PQ0D2K5 195 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 UNQ5815/PRO19632Q6UWF5 114 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 PPP1R27Q86WC6 154 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZNF491Q8N8L2 437 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 NUDCD2Q8WVJ2 157 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 FLYWCH2Q96CP2 140 aaKnown RBP13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 UBE2E2Q96LR5 201 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 TPSG1Q9NRR2 321 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 FOXA2Q9Y261 457 aaPredicted RBP13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 VSIG4Q9Y279 399 aa13.27□□□□□ -0.29
HMGCLL1-202ENST00000308161 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 CD36P16671 472 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 GNB1P62873 340 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 TMEM267Q0VDI3 215 aaPredicted RBP13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 ARL6IP1Q15041 203 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 MINDY2Q8NBR6 621 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 RNF5Q99942 180 aa13.26□□□□□ -0.29
HMGCLL1-202ENST00000308161 SEC14L6B5MCN3 397 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 SOX15O60248 233 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 GNG2P59768 71 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 CBX3Q13185 183 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 ACTBL2Q562R1 376 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 IDNKQ5T6J7 187 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 HACD4Q5VWC8 232 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 BVESQ8NE79 360 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 ARPC1AQ92747 370 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 C5orf30Q96GV9 206 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 HARBI1Q96MB7 349 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 MS4A10Q96PG2 267 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 TOLLIPQ9H0E2 274 aa13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
HMGCLL1-202ENST00000308161 SPDEFO95238 335 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 CNIH1O95406 144 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 EGR2P11161 476 aaPredicted RBP13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 DTYMKP23919 212 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 DGCR2P98153 550 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 KIAA0141Q14154 515 aaPredicted RBP13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 KCTD21Q4G0X4 260 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 H1FOOQ8IZA3 346 aaPredicted RBP13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 CENPOQ9BU64 300 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 RHBDL2Q9NX52 303 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 NUBP2Q9Y5Y2 271 aa13.24□□□□□ -0.29
HMGCLL1-202ENST00000308161 I3L521 148 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 SHOXO15266 292 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 SCGNO76038 276 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 DIRAS3O95661 229 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 IGHV3-11P01762 117 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZNF616Q08AN1 781 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 FHL3Q13643 280 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 FXYD3Q14802 87 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 RTL8BQ17RB0 113 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZNF260Q3ZCT1 412 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 C19orf54Q5BKX5 351 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 C9orf66Q5T8R8 295 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZNF562Q6V9R5 426 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 TCTEX1D1Q8N7M0 179 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 OR5H6Q8NGV6 325 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZNF355PQ9NSJ1 428 aa13.23□□□□□ -0.29
HMGCLL1-202ENST00000308161 NFYAP23511 347 aaPredicted RBP13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 CD40LGP29965 261 aa13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 TPPP2P59282 170 aa13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 PJVKQ0ZLH3 352 aa13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 ASPHD1Q5U4P2 390 aa13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 Q6ZS49 121 aa13.22□□□□□ -0.29
HMGCLL1-202ENST00000308161 TRAV18A0A075B6X5 111 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 ARPC1BO15143 372 aaKnown RBP13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 CRYZL1O95825 349 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 ECI1P42126 302 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 PITPNAQ00169 270 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 RUNX1Q01196 453 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 AKIRIN2Q53H80 203 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 OR5T1Q8NG75 326 aa13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 ZMAT5Q9UDW3 170 aaKnown RBP13.21□□□□□ -0.29
HMGCLL1-202ENST00000308161 SSX5O60225 188 aa13.2□□□□□ -0.3
HMGCLL1-202ENST00000308161 TRGV3P03979 118 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms