RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 THBS3P49746 956 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 EBI3Q14213 229 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 FBLN7Q53RD9 439 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 AADACL3Q5VUY0 350 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 LPCAT3Q6P1A2 487 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 ADTRPQ96IZ2 230 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 EAF1Q96JC9 268 aaPredicted RBP19.6■□□□□ 0.73
HOXC9-201ENST00000303450 AKR1E2Q96JD6 320 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 CHST1O43916 411 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 APOA2P02652 100 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 ZNF735P0CB33 412 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 GNRHRP30968 328 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 DHRS7BQ6IAN0 325 aaPredicted RBP19.59■□□□□ 0.73
HOXC9-201ENST00000303450 ZNF818PQ6ZRF7 136 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 LHFPL1Q86WI0 220 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 TERB2Q8NHR7 220 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 RBM14Q96PK6 669 aaKnown RBP19.59■□□□□ 0.73
HOXC9-201ENST00000303450 HSD17B10Q99714 261 aaKnown RBP19.59■□□□□ 0.73
HOXC9-201ENST00000303450 SLC25A33Q9BSK2 321 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 WDR12Q9GZL7 423 aaKnown RBP19.59■□□□□ 0.73
HOXC9-201ENST00000303450 WASHC3Q9Y3C0 194 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 ATRQ13535 2644 aa19.59■□□□□ 0.73
HOXC9-201ENST00000303450 OR2F2O95006 317 aa19.58■□□□□ 0.73
HOXC9-201ENST00000303450 RPL15P61313 204 aaKnown RBP19.58■□□□□ 0.73
HOXC9-201ENST00000303450 C16orf82Q7Z2V1 217 aa19.58■□□□□ 0.73
HOXC9-201ENST00000303450 DEDD2Q8WXF8 326 aa19.58■□□□□ 0.73
HOXC9-201ENST00000303450 RBMXL1Q96E39 390 aaKnown RBP19.58■□□□□ 0.73
HOXC9-201ENST00000303450 PRRT1Q99946 306 aa19.58■□□□□ 0.73
HOXC9-201ENST00000303450 TNFSF12O43508 249 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 IL7P13232 177 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 PPP5CP53041 499 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 UCP3P55916 312 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 TAGLNQ01995 201 aaKnown RBP19.57■□□□□ 0.72
HOXC9-201ENST00000303450 ZNF846Q147U1 533 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 KCTD9Q7L273 389 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 CMTM1Q8IZ96 169 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 OR51S1Q8NGJ8 323 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 HRASLSQ9HDD0 168 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 SLC35D1Q9NTN3 355 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 SCP2D1Q9UJQ7 156 aa19.57■□□□□ 0.72
HOXC9-201ENST00000303450 LINC00473A8K010 186 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 GPR31O00270 319 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 PGAM2P15259 253 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 ZNF66Q6ZN08 573 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 SLC38A6Q8IZM9 456 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 BVESQ8NE79 360 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 CCDC32Q9BV29 185 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 PRELID3BQ9Y3B1 194 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 CD40LGP29965 261 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 CBX3Q13185 183 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 EIF4EBP1Q13541 118 aaPredicted RBP19.56■□□□□ 0.72
HOXC9-201ENST00000303450 RTL8BQ17RB0 113 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 PDPNQ86YL7 162 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 Q8N6K4 173 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 TCTEX1D2Q8WW35 142 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 GPHA2Q96T91 129 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 RSRP1Q9BUV0 290 aa19.56■□□□□ 0.72
HOXC9-201ENST00000303450 NCBP2LA6PVI3 153 aaKnown RBP19.55■□□□□ 0.72
HOXC9-201ENST00000303450 RPL30P62888 115 aaKnown RBP19.55■□□□□ 0.72
HOXC9-201ENST00000303450 IDO2Q6ZQW0 420 aa19.55■□□□□ 0.72
HOXC9-201ENST00000303450 DDB2Q92466 427 aa19.55■□□□□ 0.72
HOXC9-201ENST00000303450 SLC2A8Q9NY64 477 aa19.55■□□□□ 0.72
HOXC9-201ENST00000303450 MOB4Q9Y3A3 225 aa19.55■□□□□ 0.72
HOXC9-201ENST00000303450 LINC00854A0A1B0GVQ3 168 aa19.54■□□□□ 0.72
HOXC9-201ENST00000303450 RRASP10301 218 aa19.54■□□□□ 0.72
HOXC9-201ENST00000303450 S100GP29377 79 aa19.54■□□□□ 0.72
HOXC9-201ENST00000303450 ECI1P42126 302 aa19.54■□□□□ 0.72
HOXC9-201ENST00000303450 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.54■□□□□ 0.72
HOXC9-201ENST00000303450 FLYWCH2Q96CP2 140 aaKnown RBP19.54■□□□□ 0.72
HOXC9-201ENST00000303450 NPFFR1Q9GZQ6 430 aa19.54■□□□□ 0.72
HOXC9-201ENST00000303450 C1RLQ9NZP8 487 aa19.54■□□□□ 0.72
HOXC9-201ENST00000303450 M0QZK8 103 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 IGKV1-16P04430 117 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 CATR1Q13166 79 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 KRTAP24-1Q3LI83 254 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 PHLDA2Q53GA4 152 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 OR8H1Q8NGG4 311 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 ZFAND1Q8TCF1 268 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 MARCH1Q8TCQ1 289 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 RITA1Q96K30 269 aa19.53■□□□□ 0.72
HOXC9-201ENST00000303450 MMDQ15546 238 aa19.52■□□□□ 0.72
HOXC9-201ENST00000303450 ABCA11PQ4W5N1 156 aa19.52■□□□□ 0.72
HOXC9-201ENST00000303450 OR2B11Q5JQS5 317 aa19.52■□□□□ 0.72
HOXC9-201ENST00000303450 OR4C13Q8NGP0 309 aa19.52■□□□□ 0.72
HOXC9-201ENST00000303450 OR51H1Q8NH63 302 aa19.52■□□□□ 0.72
HOXC9-201ENST00000303450 TMEM158Q8WZ71 300 aa19.52■□□□□ 0.72
HOXC9-201ENST00000303450 TAF15Q92804 592 aaKnown RBP eCLIP19.52■□□□□ 0.72
HOXC9-201ENST00000303450 ZNF486Q96H40 463 aaPredicted RBP19.52■□□□□ 0.72
HOXC9-201ENST00000303450 CENPXA8MT69 81 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 RNF212BA8MTL3 300 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 FCGR3BO75015 233 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 PEX14O75381 377 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 PGLYRP1O75594 196 aaPredicted RBP19.51■□□□□ 0.71
HOXC9-201ENST00000303450 RLN1P04808 185 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 F2RL1P55085 397 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 RPS16P62249 146 aaKnown RBP19.51■□□□□ 0.71
HOXC9-201ENST00000303450 OR13C8Q8NGS7 320 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 MRGPRFQ96AM1 343 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 RNF5Q99942 180 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 FGF16O43320 207 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms