RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 LPCAT3Q6P1A2 487 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 Q6YL49 198 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 SLC25A42Q86VD7 318 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 TGIF2LXQ8IUE1 241 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 OR8H3Q8N146 312 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 Q8N6K4 173 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 CAPSLQ8WWF8 208 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 RPEQ96AT9 228 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 ZNF486Q96H40 463 aaPredicted RBP7.61□□□□□ -1.19
RFX3-201ENST00000302303 S1PR3Q99500 378 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 CDC42EP3Q9UKI2 254 aa7.61□□□□□ -1.19
RFX3-201ENST00000302303 TEP1Q99973 2627 aaKnown RBP7.61□□□□□ -1.19
RFX3-201ENST00000302303 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.19
RFX3-201ENST00000302303 FAM240BA0A1B0GVZ2 78 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 CRYM-AS1A6NIL9 109 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 SRRM4A7MD48 611 aaKnown RBP7.6□□□□□ -1.19
RFX3-201ENST00000302303 RAMP3O60896 148 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 VENTXO95231 258 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 IGKV1-39P01597 117 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 IGKV1D-39P04432 117 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 RLN1P04808 185 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 PGAM2P15259 253 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 F2RP25116 425 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 IL3RAP26951 378 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 ECI1P42126 302 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 IER3P46695 156 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 MZT2BQ6NZ67 158 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 ZNF66Q6ZN08 573 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 TBC1D26Q86UD7 250 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 ZFAND1Q8TCF1 268 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 TP53RKQ96S44 253 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 HSD17B10Q99714 261 aaKnown RBP7.6□□□□□ -1.19
RFX3-201ENST00000302303 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 BEX2Q9BXY8 128 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 C20orf85Q9H1P6 137 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 DPAGT1Q9H3H5 408 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 ESM1Q9NQ30 184 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 PLSCR3Q9NRY6 295 aa7.6□□□□□ -1.19
RFX3-201ENST00000302303 TRAV6A0A075B6T7 132 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 A0A0B4J293 547 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 ARPC1BO15143 372 aaKnown RBP7.59□□□□□ -1.19
RFX3-201ENST00000302303 TXNL1O43396 289 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 IGHV4-59P01825 116 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 FBP1P09467 338 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 ANXA7P20073 488 aaKnown RBP7.59□□□□□ -1.19
RFX3-201ENST00000302303 CD1BP29016 333 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 SRP14P37108 136 aaKnown RBP7.59□□□□□ -1.19
RFX3-201ENST00000302303 THBS3P49746 956 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 OXA1LQ15070 435 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 AANATQ16613 207 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 SP6Q3SY56 376 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 MOB3BQ86TA1 216 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 THNSL2Q86YJ6 484 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 TEX29Q8N6K0 151 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 SIGLECL1Q8N7X8 197 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 LHFPL5Q8TAF8 219 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 GLYATL2Q8WU03 294 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 SSX3Q99909 188 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 ALX4Q9H161 411 aaPredicted RBP7.59□□□□□ -1.19
RFX3-201ENST00000302303 NUDT15Q9NV35 164 aa7.59□□□□□ -1.19
RFX3-201ENST00000302303 PTTG1O95997 202 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 IGLV2-23P01705 113 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 SNRNP70P08621 437 aaKnown RBP7.58□□□□□ -1.2
RFX3-201ENST00000302303 SRD5A1P18405 259 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 HNF1AP20823 631 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 CNTFRP26992 372 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 DEFA1P59665 94 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 DEFA3P59666 94 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 PPP1R1AQ13522 171 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 MRGPRG-AS1Q2M3A8 158 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 TMEM128Q5BJH2 165 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 KCTD9Q7L273 389 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 CMTM1Q8IZ96 169 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 OR51H1Q8NH63 302 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 GALNT14Q96FL9 552 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
RFX3-201ENST00000302303 PRR13Q9NZ81 148 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 FAM96BQ9Y3D0 163 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 NUBP2Q9Y5Y2 271 aa7.58□□□□□ -1.2
RFX3-201ENST00000302303 C3orf85A0A1B0GTC6 90 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 A6NDX4 124 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 H3BUX3 64 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 HOXA3O43365 443 aaPredicted RBP7.57□□□□□ -1.2
RFX3-201ENST00000302303 IGKV1D-33P01593 117 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 IGKV1-33P01594 117 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 AMY1AP04745 511 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 IL6RP08887 468 aaPredicted RBP7.57□□□□□ -1.2
RFX3-201ENST00000302303 H2AFB2P0C5Z0 115 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 OR5AC1P0C628 307 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 OR4E1P0C645 316 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 FAM157CP0CG43 387 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 AKR1C4P17516 323 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 UCP1P25874 307 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 F2RL1P55085 397 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 RAG2P55895 527 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 RAB25P57735 213 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 TMEM187Q14656 261 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 LRRC75BQ2VPJ9 315 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 TMEM177Q53S58 311 aa7.57□□□□□ -1.2
RFX3-201ENST00000302303 OR2B11Q5JQS5 317 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms