RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ZC4H2Q9NQZ6 224 aa9.9□□□□□ -0.82
TPM3-202ENST00000302206 DSCAML1Q8TD84 2053 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 DIDO1Q9BTC0 2240 aaKnown RBP9.89□□□□□ -0.83
TPM3-202ENST00000302206 TRBV23-1A0A0A0MS06 115 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 KIAA1324LA8MWY0 1029 aaPredicted RBP9.89□□□□□ -0.83
TPM3-202ENST00000302206 KCNAB3O43448 404 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 JTBO76095 146 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 NMBP08949 121 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 DAOP14920 347 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
TPM3-202ENST00000302206 AKR1C2P52895 323 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 RPL31P62899 125 aaKnown RBP9.89□□□□□ -0.83
TPM3-202ENST00000302206 VAMP2P63027 116 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 LTC4SQ16873 150 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 CXorf66Q5JRM2 361 aaPredicted RBP9.89□□□□□ -0.83
TPM3-202ENST00000302206 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
TPM3-202ENST00000302206 HEPN1Q6WQI6 88 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 FGFRL1Q8N441 504 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 C8orf31Q8N9H6 132 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 RAB39BQ96DA2 213 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 ADTRPQ96IZ2 230 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 RAB40CQ96S21 281 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 SLC25A31Q9H0C2 315 aa9.89□□□□□ -0.83
TPM3-202ENST00000302206 FAM90A9PA6NNJ1 464 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 C17orf98A8MV24 154 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 WRBO00258 174 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 DVL1O14640 695 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 RAB29O14966 203 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 PROP1O75360 226 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 IGHV2-70P01814 119 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 DANCRP0C864 163 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 RRASP10301 218 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 IGFBP2P18065 325 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 THBS3P49746 956 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 ZNF134P52741 427 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 TMEM33P57088 247 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 BRWD1-AS2P59051 145 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 TAS2R30P59541 319 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 POLR2GP62487 172 aaKnown RBP eCLIP9.88□□□□□ -0.83
TPM3-202ENST00000302206 BAXQ07812 192 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 CT45A1Q5HYN5 189 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 TMEM200BQ69YZ2 307 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 LYPD2Q6UXB3 125 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 BTNL3Q6UXE8 466 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 SLC25A48Q6ZT89 311 aaKnown RBP9.88□□□□□ -0.83
TPM3-202ENST00000302206 PDZD9Q8IXQ8 264 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 UBAC2Q8NBM4 344 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 CT45A3Q8NHU0 189 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 ZNF714Q96N38 554 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 ARV1Q9H2C2 271 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 C19orf12Q9NSK7 152 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 LYRM2Q9NU23 88 aaPredicted RBP9.88□□□□□ -0.83
TPM3-202ENST00000302206 CTSZQ9UBR2 303 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 CACNG5Q9UF02 275 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 FBXL17Q9UF56 701 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 PRELID3BQ9Y3B1 194 aa9.88□□□□□ -0.83
TPM3-202ENST00000302206 ARFGEF3Q5TH69 2177 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 BORCS7-ASMTA0A0B4J1R7 106 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 MEX3AA1L020 520 aaKnown RBP9.87□□□□□ -0.83
TPM3-202ENST00000302206 LINC00473A8K010 186 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 M0R1X1 148 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 TOR1AO14656 332 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 SSSCA1O60232 199 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 RAMP3O60896 148 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 FCN3O75636 299 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 S1PR2O95136 353 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 HPRT1P00492 218 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 OMGP23515 440 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 COL8A2P25067 703 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 Q6ZRM9 215 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 ZNF596Q8TC21 504 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 DDB2Q92466 427 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 CACFD1Q9UGQ2 172 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 AKAP9Q99996 3911 aa9.87□□□□□ -0.83
TPM3-202ENST00000302206 HIVEP1P15822 2718 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 PDZD2O15018 2839 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 A0A087X0M5 115 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 A0A1B0GX30 115 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 SLC31A2O15432 143 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 FGF16O43320 207 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 SYNGR2O43760 224 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 CHST1O43916 411 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 MED6O75586 246 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 LY86O95711 162 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 EPHA1P21709 976 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 PAX9P55771 341 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 DLX6P56179 175 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 RPL23AP62750 156 aaKnown RBP9.86□□□□□ -0.83
TPM3-202ENST00000302206 EWSR1Q01844 656 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM3-202ENST00000302206 ZNF816Q0VGE8 651 aaPredicted RBP9.86□□□□□ -0.83
TPM3-202ENST00000302206 ZNF273Q14593 569 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 AARDQ4LEZ3 155 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 TMEM155Q4W5P6 130 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 MIDNQ504T8 468 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 PRAMEF5Q5TYX0 476 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 NCR3LG1Q68D85 454 aa9.86□□□□□ -0.83
TPM3-202ENST00000302206 SP5Q6BEB4 398 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms