RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PMP22Q01453 160 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 DPPA3Q6W0C5 159 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 KIAA1456Q9P272 454 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 H7BYZ3 331 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 SYNGR2O43760 224 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 CLDN1O95832 211 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 OR2H2O95918 312 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 BMP5P22003 454 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 CHRNB4P30926 498 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 TAS2R30P59541 319 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 ARG2P78540 354 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 ZNF816Q0VGE8 651 aaPredicted RBP11.37□□□□□ -0.59
CTDP1-202ENST00000299543 ZNF324BQ6AW86 544 aaPredicted RBP11.37□□□□□ -0.59
CTDP1-202ENST00000299543 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 NAGKQ9UJ70 344 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
CTDP1-202ENST00000299543 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
CTDP1-202ENST00000299543 M0QZ24 198 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 CCL25O15444 150 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 CYB5R3P00387 301 aaPredicted RBP11.36□□□□□ -0.59
CTDP1-202ENST00000299543 IL24Q13007 206 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 ZNF826PQ6ZT77 177 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 TPRX1Q8N7U7 411 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 TXN2Q99757 166 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 CDH20Q9HBT6 801 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 A0A1W2PNU3 283 aaPredicted RBP11.36□□□□□ -0.59
CTDP1-202ENST00000299543 ACP1P24666 158 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
CTDP1-202ENST00000299543 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 MMDQ15546 238 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 FBXW9Q5XUX1 488 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 ZNF787Q6DD87 383 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 CNEP1R1Q8N9A8 125 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 C11orf1Q9H5F2 150 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 TNFSF15O95150 251 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 FAM3BP58499 235 aaPredicted RBP11.36□□□□□ -0.59
CTDP1-202ENST00000299543 BAXQ07812 192 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 SAXO1Q8IYX7 474 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 SCCPDHQ8NBX0 429 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 OR13D1Q8NGV5 346 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 RFESDQ8TAC1 157 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 RNF115Q9Y4L5 304 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 MPC1Q9Y5U8 109 aa11.36□□□□□ -0.59
CTDP1-202ENST00000299543 UBE2L5PA0A1B0GUS4 154 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 ZNF320A2RRD8 509 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 GRIFINA4D1Z8 144 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 TMEM210A6NLX4 147 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 SP1P08047 785 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 TDGF1P13385 188 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
CTDP1-202ENST00000299543 CIB3Q96Q77 187 aaPredicted RBP11.35□□□□□ -0.59
CTDP1-202ENST00000299543 A0A087WWC5 75 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 OR5B21A6NL26 309 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 CHRNA7P36544 502 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
CTDP1-202ENST00000299543 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
CTDP1-202ENST00000299543 RIF1Q5UIP0 2472 aaKnown RBP11.35□□□□□ -0.59
CTDP1-202ENST00000299543 IGHV3-43A0A0B4J1X8 118 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 DEFB108AA8MXU0 73 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 KLRC4-KLRK1H3BQV0 150 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 WNT9BO14905 357 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 HBE1P02100 147 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 IGHV3-43DP0DP04 118 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 GAGE1Q13065 139 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 TBC1D28Q2M2D7 210 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 C16orf82Q7Z2V1 217 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 CLDND2Q8NHS1 167 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 BTF3L4Q96K17 158 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 RTL8AQ9BWD3 113 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 A0A1B0GU03 582 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 J3QT63 122 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 AGFG2O95081 481 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 IGHV3-13P01766 116 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 IGHV3-7P01780 117 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 IL6RP08887 468 aaPredicted RBP11.34□□□□□ -0.59
CTDP1-202ENST00000299543 GALR1P47211 349 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 LINC00205P59089 165 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 NRN1LQ496H8 165 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 C1orf194Q5T5A4 169 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 RBMXL1Q96E39 390 aaKnown RBP11.34□□□□□ -0.59
CTDP1-202ENST00000299543 RCC1LQ96I51 464 aaKnown RBP11.34□□□□□ -0.59
CTDP1-202ENST00000299543 RAB40CQ96S21 281 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 OR51I2Q9H344 312 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 IGKV1-5P01602 117 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 G6PCP35575 357 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 RNPS1Q15287 305 aaKnown RBP11.34□□□□□ -0.59
CTDP1-202ENST00000299543 LEMD1Q68G75 181 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 OR1L1Q8NH94 360 aa11.34□□□□□ -0.59
CTDP1-202ENST00000299543 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms