RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GCM2O75603 506 aaPredicted RBP12.85□□□□□ -0.35
SCN3B-201ENST00000299333 FOXA3P55318 350 aaPredicted RBP12.85□□□□□ -0.35
SCN3B-201ENST00000299333 RTP5Q14D33 572 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 MRAPQ8TCY5 172 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 EDA2RQ9HAV5 297 aa12.85□□□□□ -0.35
SCN3B-201ENST00000299333 ANOS1P23352 680 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 HIST1H1AQ02539 215 aaPredicted RBP12.84□□□□□ -0.35
SCN3B-201ENST00000299333 HIKESHIQ53FT3 197 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 TTC9CQ8N5M4 171 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 RAB1CQ92928 201 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 SSC5DA1L4H1 1573 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 PPP1R17O96001 155 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 UNC119Q13432 240 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 SPSB4Q96A44 273 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 GPR35Q9HC97 309 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 OR11H12B2RN74 326 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 OR11H1Q8NG94 326 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 OR11H2Q8NH07 326 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 IGKV3D-11A0A0A0MRZ8 115 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 IMMP2LQ96T52 175 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
SCN3B-201ENST00000299333 H3BTX0 84 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF48Q96MX3 618 aaPredicted RBP12.83□□□□□ -0.36
SCN3B-201ENST00000299333 PPIAL4DF5H284 164 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
SCN3B-201ENST00000299333 CD1AP06126 327 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 MC5RP33032 325 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 MRAP2Q96G30 205 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 LINC00614P0C842 121 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
SCN3B-201ENST00000299333 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 OR10J6PQ8NGY7 276 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 TMEM101Q96IK0 257 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 CENPVL1A0A0U1RR11 272 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 A0A1W2PRS3 328 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 ATRAIDQ6UW56 229 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 Q6ZS52 159 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF764Q96H86 408 aaPredicted RBP12.83□□□□□ -0.36
SCN3B-201ENST00000299333 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 C5orf66Q9H5L9 145 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 MRPS16Q9Y3D3 137 aaKnown RBP12.83□□□□□ -0.36
SCN3B-201ENST00000299333 PHLDA3Q9Y5J5 127 aa12.83□□□□□ -0.36
SCN3B-201ENST00000299333 CELA2BP08218 269 aaPredicted RBP12.82□□□□□ -0.36
SCN3B-201ENST00000299333 RPS11P62280 158 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCN3B-201ENST00000299333 ARRDC1-AS1Q9H2J1 176 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF257Q9Y2Q1 563 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 FSTP19883 344 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 EFNB1P98172 346 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 FGFRL1Q8N441 504 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 RASL10BQ96S79 203 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 DSPPQ9NZW4 1301 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 NPFFR1Q9GZQ6 430 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 CARHSP1Q9Y2V2 147 aaKnown RBP12.82□□□□□ -0.36
SCN3B-201ENST00000299333 ASAH2BP0C7U1 165 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 SFTA2Q6UW10 78 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 AQP3Q92482 292 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 BCORQ6W2J9 1755 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 CX3CL1P78423 397 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 IL11RAQ14626 422 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF645Q8N7E2 425 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 NEUROG1Q92886 237 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 PHF7Q9BWX1 381 aaPredicted RBP12.82□□□□□ -0.36
SCN3B-201ENST00000299333 WDR54Q9H977 334 aa12.82□□□□□ -0.36
SCN3B-201ENST00000299333 ITGB4P16144 1822 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 LOXL3P58215 753 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF714Q96N38 554 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 NPDC1Q9NQX5 325 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-201ENST00000299333 ZG16O60844 167 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 DYNLRB2Q8TF09 96 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
SCN3B-201ENST00000299333 TRBV5-5A0A0J9YX44 114 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 SELENOTP62341 195 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 HBBP68871 147 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 FUT5Q11128 374 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 DLL1O00548 723 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 HOXA5P20719 270 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 RPL27AP46776 148 aaKnown RBP12.81□□□□□ -0.36
SCN3B-201ENST00000299333 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 CENPWQ5EE01 88 aa12.81□□□□□ -0.36
SCN3B-201ENST00000299333 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 TRAV21A0A0B4J279 112 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 RND2P52198 227 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 CACNG7P62955 275 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 LCN2P80188 198 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 KCNMB1Q16558 191 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms