RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 A0A1W2PPR1 153 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 RNF212BA8MTL3 300 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 CGB3P0DN86 165 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 CGB7P0DN87 165 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 CLINT1Q14677 625 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 C17orf58Q2M2W7 97 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 MORN2Q502X0 79 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 TMEM88Q6PEY1 159 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 SH3BGRL3Q9H299 93 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 CALYQ9NYX4 217 aa17.64■□□□□ 0.41
SOX17-201ENST00000297316 SPTAN1Q13813 2472 aaKnown RBP17.63■□□□□ 0.41
SOX17-201ENST00000297316 FLNCQ14315 2725 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 H3BP45 60 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 CST7O76096 145 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 NDUFB7P17568 137 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 ZNF134P52741 427 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 C1orf87Q8N0U7 546 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 TCTEX1D2Q8WW35 142 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 LEAP2Q969E1 77 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 GNG12Q9UBI6 72 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 F8W036 122 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 S1PR2O95136 353 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 COL8A2P25067 703 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 SULT1A2P50226 295 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 BLOC1S1P78537 153 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 SMIM8Q96KF7 97 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 RFNGQ9Y644 331 aa17.63■□□□□ 0.41
SOX17-201ENST00000297316 F2RL2O00254 374 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 WRBO00258 174 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 MED6O75586 246 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 LY6HO94772 140 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 G6PCP35575 357 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 SPAG16Q8N0X2 631 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 BBC3Q96PG8 261 aaPredicted RBP17.62■□□□□ 0.41
SOX17-201ENST00000297316 GINS3Q9BRX5 216 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 TMEM231Q9H6L2 316 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 MMP26Q9NRE1 261 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 OR6C3Q9NZP0 311 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 JPT1Q9UK76 154 aa17.62■□□□□ 0.41
SOX17-201ENST00000297316 CLDN1O95832 211 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 ERVFRD-1P60508 538 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 HSD17B11Q8NBQ5 300 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 EPG5Q9HCE0 2579 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 SLC31A2O15432 143 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 MMP9P14780 707 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 C10orf91Q5T1B1 145 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 EIF5AL1Q6IS14 154 aaKnown RBP17.61■□□□□ 0.41
SOX17-201ENST00000297316 TMEM217Q8N7C4 229 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 FAM234AQ9H0X4 552 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 CTSZQ9UBR2 303 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 SLC25A10Q9UBX3 287 aaPredicted RBP17.61■□□□□ 0.41
SOX17-201ENST00000297316 DOCK11Q5JSL3 2073 aa17.61■□□□□ 0.41
SOX17-201ENST00000297316 BORCS7-ASMTA0A0B4J1R7 106 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 NKX6-3A6NJ46 265 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 NUDT19A8MXV4 375 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 MMP23AO75900 390 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 KRASP01116 189 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 SOD3P08294 240 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 P0C879 139 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 IAPPP10997 89 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 DYNLT3P51808 116 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 MSMO1Q15800 293 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 TREM1Q9NP99 234 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 TNFRSF13BO14836 293 aaPredicted RBP17.6■□□□□ 0.41
SOX17-201ENST00000297316 NDUFA2O43678 99 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 YPEL1O60688 119 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 F12P00748 615 aaPredicted RBP17.6■□□□□ 0.41
SOX17-201ENST00000297316 FLI1Q01543 452 aaPredicted RBP17.6■□□□□ 0.41
SOX17-201ENST00000297316 CATR1Q13166 79 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 C1orf229Q6ZS94 237 aaPredicted RBP17.6■□□□□ 0.41
SOX17-201ENST00000297316 OR5C1Q8NGR4 320 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 YPEL2Q96QA6 119 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 HRH4Q9H3N8 390 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 C19orf12Q9NSK7 152 aa17.6■□□□□ 0.41
SOX17-201ENST00000297316 CARHSP1Q9Y2V2 147 aaKnown RBP17.6■□□□□ 0.41
SOX17-201ENST00000297316 AKAP6Q13023 2319 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 TRGV10A0A0A0MS01 117 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 PIGBOS1A0A0B4J2F0 54 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 A0A1W2PPE3 182 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 H2AFB1P0C5Y9 115 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 SPP1P10451 314 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 NCR3LG1Q68D85 454 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 CBLN2Q8IUK8 224 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 SLC25A31Q9H0C2 315 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 IFI27L2Q9H2X8 130 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 MMP24Q9Y5R2 645 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 KBTBD11-OT1A0A1B0GTJ5 212 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 GPR12P47775 334 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 TMEM267Q0VDI3 215 aaPredicted RBP17.59■□□□□ 0.41
SOX17-201ENST00000297316 PJVKQ0ZLH3 352 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 HFEQ30201 348 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 RPL39P5Q59GN2 51 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 IL34Q6ZMJ4 242 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 EDARADDQ8WWZ3 215 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 SAT2Q96F10 170 aaPredicted RBP17.59■□□□□ 0.41
SOX17-201ENST00000297316 CLN8Q9UBY8 286 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 PRELID3BQ9Y3B1 194 aa17.59■□□□□ 0.41
SOX17-201ENST00000297316 SYNGR2O43760 224 aa17.58■□□□□ 0.41
SOX17-201ENST00000297316 ZNF66Q6ZN08 573 aa17.58■□□□□ 0.41
SOX17-201ENST00000297316 NCOR1P1Q9H4R4 102 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms