RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 HSPE1P61604 102 aaKnown RBP9.48□□□□□ -0.89
PBRM1-201ENST00000296302 SNAI3Q3KNW1 292 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 ZNF658BQ4V348 819 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-201ENST00000296302 NR2C2APQ86WQ0 139 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 OR10AG1Q8NH19 301 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 GUCD1Q96NT3 240 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 ZNF430Q9H8G1 570 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-201ENST00000296302 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 PGPA6NDG6 321 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 F8VVB4 439 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 F8VWA3 439 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 NPIPB7O75200 414 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 CA7P43166 264 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 ERVFRD-1P60508 538 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 FXYD3Q14802 87 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 C3AR1Q16581 482 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 TM2D1Q9BX74 207 aa9.48□□□□□ -0.89
PBRM1-201ENST00000296302 IGHV5-10-1A0A0J9YXX1 117 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 SH2D7A6NKC9 451 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-201ENST00000296302 CRYBB3P26998 211 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 CKS2P33552 79 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 NUBP1P53384 320 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 SOX8P57073 446 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 EGR4Q05215 589 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 KCNMB1Q16558 191 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 SPANXN1Q5VSR9 72 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 ASPHD2Q6ICH7 369 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 CALHM1Q8IU99 346 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 HSPB7Q9UBY9 170 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 TRAV9-1A0A075B6T8 112 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 TMEM229AB2RXF0 380 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 C21orf140B9A014 251 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 FAM157AC9JC47 383 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 GCSHP23434 173 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 MPV17P39210 176 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 TWIST1Q15672 202 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 OR5R1Q8NH85 324 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 HES7Q9BYE0 225 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 PRDM14Q9GZV8 571 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 DNAJC4Q9NNZ3 241 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 CBLN1P23435 193 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 RTBDNQ9BSG5 229 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-201ENST00000296302 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 AUP1Q9Y679 476 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 AGFG2O95081 481 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 TMEM177Q53S58 311 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 HES3Q5TGS1 186 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 ZNF256Q9Y2P7 627 aaPredicted RBP9.47□□□□□ -0.89
PBRM1-201ENST00000296302 ADAMTSL1Q8N6G6 1762 aa9.47□□□□□ -0.89
PBRM1-201ENST00000296302 COL4A1P02462 1669 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 C5orf67F2Z3F1 127 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 IGHV4-34P06331 123 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 RNF224P0DH78 156 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 COX5BP10606 129 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 CCL4P13236 92 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 GCHFRP30047 84 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.89
PBRM1-201ENST00000296302 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.89
PBRM1-201ENST00000296302 ZNF841Q6ZN19 808 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 GPHA2Q96T91 129 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.89
PBRM1-201ENST00000296302 A0A1W2PPE3 182 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 MGPP08493 103 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 MC5RP33032 325 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 LY6G6FQ5SQ64 297 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 DNLZQ5SXM8 178 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 CLDND2Q8NHS1 167 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 RND1Q92730 232 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 HEXA-AS1Q9H8Q6 139 aa9.46□□□□□ -0.89
PBRM1-201ENST00000296302 RPL31P62899 125 aaKnown RBP9.46□□□□□ -0.9
PBRM1-201ENST00000296302 RPL8P62917 257 aaKnown RBP9.46□□□□□ -0.9
PBRM1-201ENST00000296302 GLRX5Q86SX6 157 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 TPRX1Q8N7U7 411 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 IGHV3OR15-7A0A075B7D8 119 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 LIPFP07098 398 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 UCP2P55851 309 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 RPS20P60866 119 aaKnown RBP9.46□□□□□ -0.9
PBRM1-201ENST00000296302 C10orf128Q5T292 105 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 OR1N2Q8NGR9 330 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 RAB37Q96AX2 223 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 OR8B2Q96RD0 313 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 RNF126Q9BV68 326 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 RAB1BQ9H0U4 201 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 IL36BQ9NZH7 164 aa9.46□□□□□ -0.9
PBRM1-201ENST00000296302 DOCK5Q9H7D0 1870 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 UCP1P25874 307 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 SFTPA2Q8IWL1 248 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 SEC16AO15027 2179 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 LOC107984156A0A0G2JMH3 177 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 S1PR2O95136 353 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 COX6CP09669 75 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 FGF5P12034 268 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 TMEM136Q6ZRR5 245 aa9.45□□□□□ -0.9
PBRM1-201ENST00000296302 ARL17AQ8IVW1 177 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms