RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 GRPEL2Q8TAA5 225 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 NEDD4LQ96PU5 975 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 TMED9Q9BVK6 235 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 ELOVL1Q9BW60 279 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 ZNF355PQ9NSJ1 428 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 CHCHD3Q9NX63 227 aaKnown RBP7.07□□□□□ -1.28
CNOT9-202ENST00000295701 WASHC3Q9Y3C0 194 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 DNAH10Q8IVF4 4471 aa7.07□□□□□ -1.28
CNOT9-202ENST00000295701 SOCS1O15524 211 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 SLC25A17O43808 307 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 RBMXL2O75526 392 aaKnown RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 CSN3P07498 182 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 SCTP09683 121 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 CEACAM6P40199 344 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 SYNJ2BPP57105 145 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 RPS16P62249 146 aaKnown RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 RPS27AP62979 156 aaKnown RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 KLF5Q13887 457 aaPredicted RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 FXYD3Q14802 87 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 PYHIN1Q6K0P9 492 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 ZNF383Q8NA42 475 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 CYGBQ8WWM9 190 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 UQCC2Q9BRT2 126 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 THAP7Q9BT49 309 aaPredicted RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 CHMP1AQ9HD42 196 aaPredicted RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 RANGRFQ9HD47 186 aaPredicted RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 SMPD3Q9NY59 655 aaPredicted RBP7.06□□□□□ -1.28
CNOT9-202ENST00000295701 ABRACLQ9P1F3 81 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 STEAP1Q9UHE8 339 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 AK3Q9UIJ7 227 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 LRRC42Q9Y546 428 aa7.06□□□□□ -1.28
CNOT9-202ENST00000295701 C13orf42A0A1B0GVH6 325 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 IRGMA1A4Y4 181 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 IGLV2-23P01705 113 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 TFAP2AP05549 437 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 APELAP0DMC3 54 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 CPEP16870 476 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 MC5RP33032 325 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 QRFPP83859 136 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 DYRK1AQ13627 763 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 LRRTM1Q86UE6 522 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 POC5Q8NA72 575 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 TMEM59Q9BXS4 323 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 SLA2Q9H6Q3 261 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 TUBA4BQ9H853 241 aa7.05□□□□□ -1.28
CNOT9-202ENST00000295701 IGKV1-6A0A0C4DH72 117 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 TMEM14DPA8MWL7 114 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 SLC22A1O15245 554 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 RBBP9O75884 186 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 CRYGBP07316 175 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 CD3GP09693 182 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 ZP3P21754 424 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 CD40LGP29965 261 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 HLA-DRB3P79483 266 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 ACSM3Q53FZ2 586 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 C1orf100Q5SVJ3 147 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 NKAIN3Q8N8D7 197 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 C5orf30Q96GV9 206 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 TSNAXQ99598 290 aaKnown RBP7.04□□□□□ -1.28
CNOT9-202ENST00000295701 RNF5Q99942 180 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 TM2D1Q9BX74 207 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 LPAR5Q9H1C0 372 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 PLEKHA3Q9HB20 300 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 PLEKHJ1Q9NW61 149 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 GHRLQ9UBU3 117 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 SELENOKQ9Y6D0 94 aa7.04□□□□□ -1.28
CNOT9-202ENST00000295701 TRBV6-6A0A0A6YYG2 114 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 EFCAB10A6NFE3 127 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 SRRM4A7MD48 611 aaKnown RBP7.03□□□□□ -1.28
CNOT9-202ENST00000295701 H0Y980 276 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 M0R1X1 148 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 ITGB1BP1O14713 200 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 CNIH1O95406 144 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 IFNA6P05013 189 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 CD1AP06126 327 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 GNAO1P09471 354 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 EDN2P20800 178 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 MECP2P51608 486 aaKnown RBP7.03□□□□□ -1.28
CNOT9-202ENST00000295701 TMEM50BP56557 158 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 WNT4P56705 351 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 TAS2R43P59537 309 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 MED21Q13503 144 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 P2RY14Q15391 338 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 RBM48Q5RL73 367 aaKnown RBP7.03□□□□□ -1.28
CNOT9-202ENST00000295701 ZNF343Q6P1L6 599 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 LINC00322Q6ZN03 302 aaPredicted RBP7.03□□□□□ -1.28
CNOT9-202ENST00000295701 AHSA2Q719I0 299 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 NANOGP1Q8N7R0 232 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 PTX4Q96A99 478 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 GFI1Q99684 422 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 WFDC10AQ9H1F0 79 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 HIPK2Q9H2X6 1198 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 Q9N2K0 584 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 SLC35D1Q9NTN3 355 aa7.03□□□□□ -1.28
CNOT9-202ENST00000295701 PEF1Q9UBV8 284 aaKnown RBP7.03□□□□□ -1.28
CNOT9-202ENST00000295701 PSORS1C1Q9UIG5 152 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms