RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TSPAN9O75954 239 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 S1PR2O95136 353 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 CLDN14O95500 239 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 APOC3P02656 99 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 CAMLGP49069 296 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PPOXP50336 477 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 TAS2R30P59541 319 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 H2BFWTQ7Z2G1 175 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 ZCCHC24Q8N2G6 241 aaKnown RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 CACNA1DQ01668 2161 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 KALRNO60229 2985 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PLCE1Q9P212 2302 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 ITGB1BP1O14713 200 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 IAPPP10997 89 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 C17orf58Q2M2W7 97 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 TMEM30BQ3MIR4 351 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 FAM216BQ8N7L0 139 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 GNPNAT1Q96EK6 184 aaPredicted RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 ATP5SQ99766 215 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 CISD1Q9NZ45 108 aaKnown RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 PPIAL4EA0A075B759 164 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 hADV38S2A0JD32 116 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 TMEM218A2RU14 115 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 ZNF729A6NN14 1252 aaPredicted RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 LINC00473A8K010 186 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 B8ZZF3 427 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PPIAL4DF5H284 164 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 RAB29O14966 203 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 RBMXL2O75526 392 aaKnown RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 IFNA5P01569 189 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PPIAL4FP0DN26 164 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 IGFBP2P18065 325 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 M6PRP20645 277 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 GNLYP22749 145 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 DUTP33316 252 aaKnown RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 UBE2KP61086 200 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 ZNF616Q08AN1 781 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 C11orf71Q6IPW1 123 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 DUX4L9Q6RFH8 374 aaPredicted RBP7.56□□□□□ -1.2
PDPN-201ENST00000294489 BTNL8Q6UX41 500 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 ABHD14AQ9BUJ0 271 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 SH3BGRL3Q9H299 93 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 TREM1Q9NP99 234 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 GFOD1Q9NXC2 390 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 CACFD1Q9UGQ2 172 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PRELID3BQ9Y3B1 194 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 PPIAL4AQ9Y536 164 aa7.56□□□□□ -1.2
PDPN-201ENST00000294489 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TRIM77I1YAP6 450 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 M0R1X1 148 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TSPAN15O95858 294 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 NDUFB7P17568 137 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 ATP6V0CP27449 155 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 UQCRFS1P47985 274 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 BRWD1-AS2P59051 145 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 HBG1P69891 147 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 HBG2P69892 147 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TNFRSF9Q07011 255 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 SLC25A24Q6NUK1 477 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TCF23Q7RTU1 214 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 ODF3L1Q8IXM7 274 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 OR2G3Q8NGZ4 309 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 CCL17Q92583 94 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TMEM106BQ9NUM4 274 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 CHD8Q9HCK8 2581 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 HPRT1P00492 218 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 P0C879 139 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 DEFA5Q01523 94 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 AKR1C1Q04828 323 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TMEM267Q0VDI3 215 aaPredicted RBP7.55□□□□□ -1.2
PDPN-201ENST00000294489 MIDNQ504T8 468 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 NCR3LG1Q68D85 454 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
PDPN-201ENST00000294489 IFI27L2Q9H2X8 130 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 GAB2Q9UQC2 676 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 SPTA1P02549 2419 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 ICE1Q9Y2F5 2266 aa7.55□□□□□ -1.2
PDPN-201ENST00000294489 MARCH11A6NNE9 402 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 FCGR3BO75015 233 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 FCN3O75636 299 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 IGHV3-7P01780 117 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 ZNF134P52741 427 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 SPANXN5Q5MJ07 72 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 COMMD1Q8N668 190 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.54□□□□□ -1.2
PDPN-201ENST00000294489 LYPD6BQ8NI32 183 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 S1PR3Q99500 378 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 C19orf12Q9NSK7 152 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 IDI2-AS1Q9NZ38 188 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 SLC25A10Q9UBX3 287 aaPredicted RBP7.54□□□□□ -1.2
PDPN-201ENST00000294489 PCNX1Q96RV3 2341 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 AGPAT2O15120 278 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 RBFOX2O43251 390 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms