RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SPACA3Q8IXA5 215 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 CD177Q8N6Q3 437 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 LRRC29Q8WV35 223 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 LURAP1Q96LR2 239 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 DCTN5Q9BTE1 182 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 TUBG2Q9NRH3 451 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.58□□□□□ -0.4
CCDC116-201ENST00000292779 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 CGAP01215 116 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 ZNF343Q6P1L6 599 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 SEM1Q6ZVN7 128 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 METTL1Q9UBP6 276 aaKnown RBP12.58□□□□□ -0.4
CCDC116-201ENST00000292779 PROCRQ9UNN8 238 aa12.58□□□□□ -0.4
CCDC116-201ENST00000292779 TLN1Q9Y490 2541 aaKnown RBP12.58□□□□□ -0.4
CCDC116-201ENST00000292779 LINC00473A8K010 186 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 CEACAM4O75871 244 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 PLA2G5P39877 138 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 Q3ZCU0 254 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 BHLHA15Q7RTS1 189 aaPredicted RBP12.57□□□□□ -0.4
CCDC116-201ENST00000292779 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 PINX1Q96BK5 328 aaKnown RBP12.57□□□□□ -0.4
CCDC116-201ENST00000292779 PSG11Q9UQ72 335 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 ZG16O60844 167 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 CLDN14O95500 239 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 IFNA17P01571 189 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 NQO2P16083 231 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 RPS10P46783 165 aaKnown RBP12.57□□□□□ -0.4
CCDC116-201ENST00000292779 EDDM3AQ14507 147 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 ELOBQ15370 118 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 LTC4SQ16873 150 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 C1QL4Q86Z23 238 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 OR2Z1Q8NG97 314 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 Q8WTZ3 238 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
CCDC116-201ENST00000292779 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 IGKV1D-33P01593 117 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 IGKV1-33P01594 117 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 EGR1P18146 543 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 PRDX2P32119 198 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 ALKBH2Q6NS38 261 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 H2BFWTQ7Z2G1 175 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 DTD1Q8TEA8 209 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 CA5BP1Q8WTZ4 195 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 HCFC1P51610 2035 aa12.56□□□□□ -0.4
CCDC116-201ENST00000292779 A0A1B0GWJ7 208 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 RAB29O14966 203 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 CXCL1P09341 107 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 RPS16P62249 146 aaKnown RBP12.55□□□□□ -0.4
CCDC116-201ENST00000292779 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 SPINK9Q5DT21 86 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 ZNF66Q6ZN08 573 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 BEND4Q6ZU67 534 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 ZADH2Q8N4Q0 377 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 RPP25LQ8N5L8 163 aaKnown RBP12.55□□□□□ -0.4
CCDC116-201ENST00000292779 AGMATQ9BSE5 352 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 CADP27708 2225 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 ATRXP46100 2492 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 CEBPZOSA8MTT3 80 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 SPINT2O43291 252 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 S100A8P05109 93 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 P2RY6Q15077 328 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 ACSM6Q6P461 480 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 MRGPRGQ86SM5 289 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 LRP11Q86VZ4 500 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 HSD17B10Q99714 261 aaKnown RBP12.55□□□□□ -0.4
CCDC116-201ENST00000292779 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 SLC39A9Q9NUM3 307 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 VAX2Q9UIW0 290 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 SLC25A15Q9Y619 301 aa12.55□□□□□ -0.4
CCDC116-201ENST00000292779 AP4M1O00189 453 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 ZNF737O75373 536 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 RBMXL2O75526 392 aaKnown RBP12.54□□□□□ -0.4
CCDC116-201ENST00000292779 SLC16A13Q7RTY0 426 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 CENPVQ7Z7K6 275 aaPredicted RBP12.54□□□□□ -0.4
CCDC116-201ENST00000292779 LHX4Q969G2 390 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 PLPPR2Q96GM1 343 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 IGKV1D-17A0A075B6S4 117 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
CCDC116-201ENST00000292779 MBD3L3A6NE82 208 aaPredicted RBP12.54□□□□□ -0.4
CCDC116-201ENST00000292779 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
CCDC116-201ENST00000292779 HTD2P86397 168 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 ATP6V1FQ16864 119 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 MBD3L2Q8NHZ7 208 aaPredicted RBP12.54□□□□□ -0.4
CCDC116-201ENST00000292779 P2RX4Q99571 388 aa12.54□□□□□ -0.4
CCDC116-201ENST00000292779 MARCH11A6NNE9 402 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms