RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 NANOS3P60323 173 aaKnown RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 SSPNQ14714 243 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 KRTCAP3Q53RY4 240 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ZNF764Q96H86 408 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 DNAJC4Q9NNZ3 241 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 MPDU1O75352 247 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 CD8AP01732 235 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 PQLC2Q6ZP29 291 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 OR2Y1Q8NGV0 311 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 GALNT14Q96FL9 552 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 GPA33Q99795 319 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 BEX4Q9NWD9 120 aaPredicted RBP9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 ZNF638Q14966 1978 aaKnown RBP9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 EML2O95834 649 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 FXYD3Q14802 87 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 SPINK14Q6IE38 97 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 ST6GALNAC3Q8NDV1 305 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 SLC25A40Q8TBP6 338 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 PGLYRP4Q96LB8 373 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 FAM117AQ9C073 453 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 IL36RNQ9UBH0 155 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 A0A1W2PPC1 479 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 CEACAM18A8MTB9 384 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 TSPAN13O95857 204 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 HPRT1P00492 218 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 GPBAR1Q8TDU6 330 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 TMEM45BQ96B21 275 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 LGALS3P17931 250 aaKnown RBP9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 ID1P41134 155 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 RND3P61587 244 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 FAM169BQ8N8A8 192 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 NFAM1Q8NET5 270 aaPredicted RBP9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 ZNF488Q96MN9 340 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 RTN4RQ9BZR6 473 aa9.3□□□□□ -0.92
PKNOX1-201ENST00000291547 HERPUD1Q15011 391 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 C3AR1Q16581 482 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 CXorf66Q5JRM2 361 aaPredicted RBP9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 TAF15Q92804 592 aaKnown RBP eCLIP9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 NEU1Q99519 415 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 MAP1LC3AQ9H492 121 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 GPR35Q9HC97 309 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 SF3B6Q9Y3B4 125 aaKnown RBP9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 CACNA1DQ01668 2161 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 CLDN14O95500 239 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 STAG3L3P0CL85 134 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 SELENOTP62341 195 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 TMEM177Q53S58 311 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 BHLHA15Q7RTS1 189 aaPredicted RBP9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 OR8G5Q8NG78 346 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 OR10AG1Q8NH19 301 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 DYNLRB2Q8TF09 96 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 GPR132Q9UNW8 380 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 C7orf71A4D174 169 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 GAB4Q2WGN9 574 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 MIC13Q5XKP0 118 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 RHBDD2Q6NTF9 364 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 TPRX1Q8N7U7 411 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 APCDD1LQ8NCL9 501 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 RARRES2Q99969 163 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 TCFL5Q9UL49 500 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 IGHV3OR15-7A0A075B7D8 119 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 AGFG2O95081 481 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 AMY1AP04745 511 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 IL4P05112 153 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 RPL27AP46776 148 aaKnown RBP9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 SOX8P57073 446 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 EFNB1P98172 346 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 NRTNQ99748 197 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 KLK15Q9H2R5 256 aa9.29□□□□□ -0.92
PKNOX1-201ENST00000291547 BGLAPP02818 100 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 IL9P15248 144 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 RPL31P62899 125 aaKnown RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 SRSF5Q13243 272 aaKnown RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 JOSD1Q15040 202 aaPredicted RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 LINC00596Q86U02 117 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 C10orf126Q8N4M7 172 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 GLRX2Q9NS18 164 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 WNT16Q9UBV4 365 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 PEF1Q9UBV8 284 aaKnown RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 R4GN57 208 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 IGKV3D-15A0A087WSY6 115 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 HRKO00198 91 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 FGF16O43320 207 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 IGKV3-15P01624 115 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 HIKESHIQ53FT3 197 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 QTRT1Q9BXR0 403 aaKnown RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 A0A1W2PP11 408 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 H0Y980 276 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 EFEMP2O95967 443 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 HKR1P10072 659 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 BTCP35070 178 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 DCAF10Q5QP82 559 aa9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 FAM53AQ6NSI3 398 aaPredicted RBP9.28□□□□□ -0.92
PKNOX1-201ENST00000291547 ZPLD1Q8TCW7 415 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms