RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PIGYQ3MUY2 71 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 PRR27Q6MZM9 219 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 KCNIP4Q6PIL6 250 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ZNF818PQ6ZRF7 136 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 NIT1Q86X76 327 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ZNF525Q8N782 197 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 GP6Q9HCN6 339 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 UBE2J1Q9Y385 318 aaPredicted RBP7.45□□□□□ -1.22
VAPB-201ENST00000265619 IGKV1D-13A0A0B4J2D9 117 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 GAGE12BA1L429 117 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 TIAF1O95411 115 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 IGKV1-13P0DP09 117 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 FBLP22087 321 aaKnown RBP7.45□□□□□ -1.22
VAPB-201ENST00000265619 LGALS7P47929 136 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 ZNF83P51522 516 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 YPEL3P61236 119 aaPredicted RBP7.45□□□□□ -1.22
VAPB-201ENST00000265619 GNB1P62873 340 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 SRPXP78539 464 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 HLA-DQA1Q5Y7H0 255 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 SIGLECL1Q8N7X8 197 aa7.45□□□□□ -1.22
VAPB-201ENST00000265619 NXF5Q9H1B4 397 aaKnown RBP7.45□□□□□ -1.22
VAPB-201ENST00000265619 TRAV8-6A0A0B4J262 113 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
VAPB-201ENST00000265619 WDR1O75083 606 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 IFNA5P01569 189 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 GLB1P16278 677 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 ECI1P42126 302 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 ATP5G3P48201 142 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 PRR31Q5SQ13 230 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.44□□□□□ -1.22
VAPB-201ENST00000265619 TMEM105Q8N8V8 129 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 OR2D3Q8NGH3 330 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 Q96M66 194 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 AKIRIN1Q9H9L7 192 aaPredicted RBP7.44□□□□□ -1.22
VAPB-201ENST00000265619 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 PCNX2A6NKB5 2137 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 IGHV1-69-2A0A0G2JMI3 117 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 A0A1W2PS18 150 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 TNFSF14O43557 240 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 GNG7O60262 68 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 CTXN2P0C2S0 81 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 AMTP48728 403 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 RPS18P62269 152 aaKnown RBP7.44□□□□□ -1.22
VAPB-201ENST00000265619 SPIN3Q5JUX0 258 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 ASB10Q8WXI3 467 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 OR4C12Q96R67 309 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 KCNK17Q96T54 332 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 DMXL1Q9Y485 3027 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 SHISA8B8ZZ34 492 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 M0R296 226 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 CORTO00230 105 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 IGLL1P15814 213 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 IER3P46695 156 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 CLDN18P56856 261 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 PSG7Q13046 419 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 EIF3IQ13347 325 aaKnown RBP7.44□□□□□ -1.22
VAPB-201ENST00000265619 ASPHD1Q5U4P2 390 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 CLDN23Q96B33 292 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 SLC7A10Q9NS82 523 aa7.44□□□□□ -1.22
VAPB-201ENST00000265619 IGKV1-27A0A075B6S5 117 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 UBE2L5PA0A1B0GUS4 154 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 NDUFB4O95168 129 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 RAC3P60763 192 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 SMIM21Q3B7S5 101 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 PMS2CLQ68D20 193 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 PRSS57Q6UWY2 283 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 GAPTQ8N292 157 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 MUC15Q8N387 334 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 KIR3DL3Q8N743 410 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 MRPS16Q9Y3D3 137 aaKnown RBP7.43□□□□□ -1.22
VAPB-201ENST00000265619 TMED7-TICAM2A0A0A6YYA0 188 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 DPRXA6NFQ7 191 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 NPIPB7O75200 414 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 SCRG1O75711 98 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 PPYP01298 95 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 FUT6P51993 359 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 SLC35B1P78383 322 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 PSG9Q00887 426 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 NHLH1Q02575 133 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 MUC21Q5SSG8 566 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 SCGB1C1Q8TD33 95 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 TMEM234Q8WY98 164 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 GMPPAQ96IJ6 420 aaPredicted RBP7.43□□□□□ -1.22
VAPB-201ENST00000265619 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 OCIAD1Q9NX40 245 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 ACACAQ13085 2346 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 SPTA1P02549 2419 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 A0A1W2PQM1 296 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 PPIAL4GP0DN37 164 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 PSMB3P49720 205 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 FBXW4P57775 412 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 SCGB2A2Q13296 93 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 ASCL4Q6XD76 172 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 OR1N2Q8NGR9 330 aa7.43□□□□□ -1.22
VAPB-201ENST00000265619 NBASA2RRP1 2371 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 OTOGLQ3ZCN5 2332 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms