RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 F2RP25116 425 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 DUTP33316 252 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 TMEM187Q14656 261 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 KLF17Q5JT82 389 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF626Q68DY1 528 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 BRD3OSQ6XYD6 125 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF833PQ6ZTB9 187 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 KCTD9Q7L273 389 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 CCDC71LQ8N9Z2 235 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF383Q8NA42 475 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 BEND2Q8NDZ0 799 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF431Q8TF32 576 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 S1PR3Q99500 378 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 OR51J1Q9H342 316 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 PIPOXQ9P0Z9 390 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 HILPDAQ9Y5L2 63 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 SONP18583 2426 aaKnown RBP7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 C7orf66A4D0T2 115 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 PRAF2O60831 178 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 SLC22A5O76082 557 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 IFNA2P01563 188 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 RPA2P15927 270 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 HTR1DP28221 377 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 UBE2E1P51965 193 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 KRTAP1-1Q07627 177 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF585BQ52M93 769 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 C12orf45Q8N5I9 185 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 ZBTB34Q8NCN2 500 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 LHFPL5Q8TAF8 219 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 GLYATL2Q8WU03 294 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 AJUBAQ96IF1 538 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 SMR3AQ99954 134 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 GAB2Q9UQC2 676 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 CCSO14618 274 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 NPFFO15130 113 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 SSNA1O43805 119 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 CREBL2O60519 120 aaPredicted RBP7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 FCGR3BO75015 233 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 SIX6O95475 246 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 DUS4LO95620 317 aaKnown RBP7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 IGKV1-39P01597 117 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 IGKV1D-39P04432 117 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 S100GP29377 79 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 SAA4P35542 130 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 LPAR6P43657 344 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 LGALS4P56470 323 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF816Q0VGE8 651 aaPredicted RBP7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 MSMO1Q15800 293 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 SSX2Q16385 188 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 TPTE2P1Q5T6R2 138 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF66Q6ZN08 573 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 MOB3BQ86TA1 216 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 TGIF2LXQ8IUE1 241 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 SPAG16Q8N0X2 631 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 GALNT14Q96FL9 552 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 HSD17B10Q99714 261 aaKnown RBP7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 NABP2Q9BQ15 211 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 TMEM222Q9H0R3 208 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 GPN1Q9HCN4 374 aaPredicted RBP7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 DPM3Q9P2X0 92 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 KCNIP3Q9Y2W7 256 aa7.87□□□□□ -1.15
SNRNP40-201ENST00000263694 IGHV1-69DA0A0B4J2H0 117 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 SNRPGP15A8MWD9 76 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 LEUTXA8MZ59 168 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 H0Y980 276 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 ADAP1O75689 374 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 IGHV1-69P01742 117 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 GAPDHP04406 335 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 HOXB5P09067 269 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 CXCL3P19876 107 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 EPHA1P21709 976 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 GATA3P23771 443 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 CD24P25063 80 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 IL3RAP26951 378 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 RAB13P51153 203 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 BCAP31P51572 246 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF137PP52743 207 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 FCN2Q15485 313 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 FBLN7Q53RD9 439 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 IL17RELQ6ZVW7 336 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 LYZL2Q7Z4W2 148 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 SELENOHQ8IZQ5 122 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 FAM216AQ8WUB2 273 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 MITD1Q8WV92 249 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 DDB2Q92466 427 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 RPEQ96AT9 228 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 RITA1Q96K30 269 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 AMMECR1Q9Y4X0 333 aaPredicted RBP7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
SNRNP40-201ENST00000263694 IGHV1-3A0A0C4DH29 117 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 A0A0U1RQK1 487 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 A0A1W2PPI3 338 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 RNF212BA8MTL3 300 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 MPTX1A8MV57 137 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 H0YJW9 148 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 S1PR2O95136 353 aa7.85□□□□□ -1.15
SNRNP40-201ENST00000263694 IGKV1-16P04430 117 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms