RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C1orf210Q8IVY1 113 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 HIST1H2BLQ99880 126 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 LINC00470Q9BZP3 86 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 SPRR3Q9UBC9 169 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 FUT9Q9Y231 359 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 DMRT1Q9Y5R6 373 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 PLCE1Q9P212 2302 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 PKDREJQ9NTG1 2253 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 PCNX2A6NKB5 2137 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 HBZP02008 142 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 RAC2P15153 192 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 TMEM241Q24JQ0 296 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 TBC1D28Q2M2D7 210 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 FBXW9Q5XUX1 488 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 NINJ1Q92982 152 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 POM121Q96HA1 1249 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 STRADBQ9C0K7 418 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 PARLQ9H300 379 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 SIRT7Q9NRC8 400 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 KCNIP1Q9NZI2 227 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 CSMD1Q96PZ7 3565 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 XKRY2A2RUG3 117 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 PRR33A8MZF0 331 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 B4E171 279 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 H7BYZ3 331 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 SP1P08047 785 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 MAS1LP35410 378 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 TSPAN7P41732 249 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 GALR1P47211 349 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 BSXQ3C1V8 233 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 MRGPRGQ86SM5 289 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 SNIP1Q8TAD8 396 aaKnown RBP7.66□□□□□ -1.18
MSH4-201ENST00000263187 BCL2L2Q92843 193 aaPredicted RBP7.66□□□□□ -1.18
MSH4-201ENST00000263187 IL22RA2Q969J5 263 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 RAB24Q969Q5 203 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 GALMQ96C23 342 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 TREM2Q9NZC2 230 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 ABI3Q9P2A4 366 aa7.66□□□□□ -1.18
MSH4-201ENST00000263187 LINC00473A8K010 186 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 SMPD2O60906 423 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 CD33P20138 364 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 NUBP1P53384 320 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 BRWD1-AS2P59051 145 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 RPL23P62829 140 aaKnown RBP7.65□□□□□ -1.18
MSH4-201ENST00000263187 OR8G5Q8NG78 346 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 OR10A7Q8NGE5 316 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 OR13D1Q8NGV5 346 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 DTD1Q8TEA8 209 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 IGHV3OR15-7A0A075B7D8 119 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 LNP1A1A4G5 178 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 ZNF729A6NN14 1252 aaPredicted RBP7.65□□□□□ -1.18
MSH4-201ENST00000263187 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.65□□□□□ -1.18
MSH4-201ENST00000263187 TNFSF15O95150 251 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 PTBP3O95758 552 aaKnown RBP7.65□□□□□ -1.18
MSH4-201ENST00000263187 PSMB3P49720 205 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 UTF1Q5T230 341 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 H2BFWTQ7Z2G1 175 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 TRIB1Q96RU8 372 aa7.65□□□□□ -1.18
MSH4-201ENST00000263187 SS18L1O75177 396 aaPredicted RBP7.65□□□□□ -1.19
MSH4-201ENST00000263187 SNRPCP09234 159 aaKnown RBP7.65□□□□□ -1.19
MSH4-201ENST00000263187 MPLP40238 635 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 ATP5G3P48201 142 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 ZNF709Q8N972 641 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 OR10P1Q8NGE3 313 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 OR13A1Q8NGR1 328 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 KLF14Q8TD94 323 aaPredicted RBP7.65□□□□□ -1.19
MSH4-201ENST00000263187 MBD3L1Q8WWY6 194 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 GTF3AQ92664 365 aaKnown RBP7.65□□□□□ -1.19
MSH4-201ENST00000263187 LSM10Q969L4 123 aaKnown RBP7.65□□□□□ -1.19
MSH4-201ENST00000263187 C14orf144Q96I85 54 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 GPR87Q9BY21 358 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 INTS1Q8N201 2190 aaKnown RBP7.65□□□□□ -1.19
MSH4-201ENST00000263187 TNCP24821 2201 aa7.65□□□□□ -1.19
MSH4-201ENST00000263187 RELNP78509 3460 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 ABCA1O95477 2261 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 TRGV5A0A0B4J1U4 118 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 PPP5D1E7EU14 171 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 YKT6O15498 198 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 MLNRO43193 412 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 FCGR3BO75015 233 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 IFNA1P01562 189 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 OPN1MWP04001 364 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 OPN1MW2P0DN77 364 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 OPN1MW3P0DN78 364 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 IGHV1-2P23083 117 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 GNB2P62879 340 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
MSH4-201ENST00000263187 TMEM164Q5U3C3 297 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 OR5B12Q96R08 314 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 HINT2Q9BX68 163 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 QTRT1Q9BXR0 403 aaKnown RBP7.64□□□□□ -1.19
MSH4-201ENST00000263187 DUSP13Q9UII6 198 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 ZNF318Q5VUA4 2279 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 A0A087X0M5 115 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 A0A1B0GX30 115 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 LRRC30A6NM36 301 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 HIST1H1BP16401 226 aaKnown RBP7.64□□□□□ -1.19
MSH4-201ENST00000263187 RNPS1Q15287 305 aaKnown RBP7.64□□□□□ -1.19
MSH4-201ENST00000263187 NRN1LQ496H8 165 aa7.64□□□□□ -1.19
MSH4-201ENST00000263187 FAM78BQ5VT40 261 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms