RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 TLN2Q9Y4G6 2542 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 LILRA5A6NI73 299 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 A6NJY4 79 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 GP1BBP13224 206 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 HIST1H1DP16402 221 aaKnown RBP7.22□□□□□ -1.25
LDB3-201ENST00000263066 LMO1P25800 156 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 UBE2NP61088 152 aaKnown RBP7.22□□□□□ -1.25
LDB3-201ENST00000263066 HBG1P69891 147 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 HBG2P69892 147 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 C19orf35Q6ZS72 473 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 CA13Q8N1Q1 262 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 MUC15Q8N387 334 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 TMEM252Q8N6L7 170 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 OR10G8Q8NGN5 311 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 ZNRF4Q8WWF5 429 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 TMEM230Q96A57 120 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 SDF2Q99470 211 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 CISD1Q9NZ45 108 aaKnown RBP7.22□□□□□ -1.25
LDB3-201ENST00000263066 FBXL7Q9UJT9 491 aa7.22□□□□□ -1.25
LDB3-201ENST00000263066 C17orf51A8MQB3 221 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 KBTBD11O94819 623 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 TOMM40O96008 361 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 PFN1P07737 140 aaKnown RBP7.21□□□□□ -1.25
LDB3-201ENST00000263066 HTR1DP28221 377 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 ARR3P36575 388 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 PRTGQ2VWP7 1150 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 SHISA2Q6UWI4 295 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 CYP2G1PQ6ZSU1 146 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 FBXL14Q8N1E6 418 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 ZNF808Q8N4W9 903 aaPredicted RBP7.21□□□□□ -1.25
LDB3-201ENST00000263066 SCARF2Q96GP6 870 aaPredicted RBP7.21□□□□□ -1.25
LDB3-201ENST00000263066 ANAPC13Q9BS18 74 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 ZNF442Q9H7R0 627 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 ZNF703Q9H7S9 590 aaPredicted RBP7.21□□□□□ -1.25
LDB3-201ENST00000263066 JKAMPQ9P055 326 aa7.21□□□□□ -1.25
LDB3-201ENST00000263066 CENPVL1A0A0U1RR11 272 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 CD300LBA8K4G0 201 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 CT62P0C5K7 136 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 HIST1H1EP10412 219 aaKnown RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 ZNF133P52736 654 aaPredicted RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 HSD52Q0P140 79 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 SPINK14Q6IE38 97 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 SLC23A3Q6PIS1 610 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 OR2T6Q8NHC8 308 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 ASB5Q8WWX0 329 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 KTI12Q96EK9 354 aaPredicted RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 UHRF2Q96PU4 802 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 UBE2L5PA0A1B0GUS4 154 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 CHST1O43916 411 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 RAMP3O60896 148 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 S1PR2O95136 353 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 FAHP16930 419 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 RRADP55042 308 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 RPS16P62249 146 aaKnown RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 KRTCAP3Q53RY4 240 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 CXorf66Q5JRM2 361 aaPredicted RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 COA6Q5JTJ3 125 aaKnown RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 MFSD12Q6NUT3 480 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 CDC20BQ86Y33 519 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 CTHRC1Q96CG8 243 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 PSMG3Q9BT73 122 aaPredicted RBP7.21□□□□□ -1.26
LDB3-201ENST00000263066 RTN4RQ9BZR6 473 aa7.21□□□□□ -1.26
LDB3-201ENST00000263066 ZNF106Q9H2Y7 1883 aaKnown RBP7.2□□□□□ -1.26
LDB3-201ENST00000263066 NKX2-6A6NCS4 301 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 C11orf94C9JXX5 98 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 SIRPB1O00241 398 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 ADAM20O43506 726 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 MMP23AO75900 390 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 THY1P04216 161 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 VSIG8P0DPA2 414 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 SRIP30626 198 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 LRRC10Q5BKY1 277 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 FAM90A2PQ658T7 463 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 PNKDQ8N490 385 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 OR2Z1Q8NG97 314 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 CT55Q8WUE5 264 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 RSPO3Q9BXY4 272 aaPredicted RBP7.2□□□□□ -1.26
LDB3-201ENST00000263066 TMEM38BQ9NVV0 291 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 MRPS16Q9Y3D3 137 aaKnown RBP7.2□□□□□ -1.26
LDB3-201ENST00000263066 MED13Q9UHV7 2174 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 TRBV5-5A0A0J9YX44 114 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 A0A1W2PNR3 127 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 C19orf67A6NJJ6 358 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 CA7P43166 264 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 SRSF7Q16629 238 aaKnown RBP eCLIP7.2□□□□□ -1.26
LDB3-201ENST00000263066 FAM71F2Q6NXP2 309 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 SPSB3Q6PJ21 355 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 CDRT4Q8N9R6 151 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 OR8B3Q8NGG8 313 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 QTRT1Q9BXR0 403 aaKnown RBP7.2□□□□□ -1.26
LDB3-201ENST00000263066 NAA60Q9H7X0 242 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 FER1L5A0AVI2 2057 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 A0A1W2PP11 408 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 HSPB2A8KAH6 182 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 B5MCH6 92 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 C17orf112F2Z3M2 114 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 UPK3AO75631 287 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 PNMTP11086 282 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 FCER1GP30273 86 aa7.2□□□□□ -1.26
LDB3-201ENST00000263066 MDH2P40926 338 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms