RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 OR4N5Q8IXE1 308 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 SLC22A24Q8N4F4 322 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 OR2AE1Q8NHA4 323 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 SGMS2Q8NHU3 365 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 PLPPR1Q8TBJ4 325 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 BORCS7Q96B45 105 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 SLC25A44Q96H78 314 aaPredicted RBP10.08□□□□□ -0.8
CCNA1-201ENST00000255465 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 NPFFR1Q9GZQ6 430 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF160Q9HCG1 818 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 HIF1ANQ9NWT6 349 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 TAS2R4Q9NYW5 299 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 POLR1DQ9Y2S0 133 aa10.08□□□□□ -0.8
CCNA1-201ENST00000255465 PTRH2Q9Y3E5 179 aaKnown RBP10.08□□□□□ -0.8
CCNA1-201ENST00000255465 MED13Q9UHV7 2174 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 MGAQ8IWI9 3026 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 A0A0B4J2E0 115 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 A0A1B0GX12 115 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 TMEM14DPA8MWL7 114 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 NDUFS4O43181 175 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 FOXS1O43638 330 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF207O43670 478 aaKnown RBP10.07□□□□□ -0.8
CCNA1-201ENST00000255465 LDB3O75112 727 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 IFNA5P01569 189 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 PSMB3P49720 205 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 FAM53BQ14153 422 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 NUP43Q8NFH3 380 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 RAB1CQ92928 201 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 NPVFQ9HCQ7 196 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 KCNIP1Q9NZI2 227 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 HHLA2Q9UM44 414 aa10.07□□□□□ -0.8
CCNA1-201ENST00000255465 TRAV38-1A0A0B4J264 116 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 LIPT2A6NK58 231 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 H3BRM9 83 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 NKX2-8O15522 239 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 RAD51DO75771 328 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 HBZP02008 142 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 WNT2P09544 360 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 SRD5A2P31213 254 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 HERV-K104P63124 156 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
CCNA1-201ENST00000255465 HLA-DRB5Q30154 266 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 MPV17L2Q567V2 206 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 FAM69BQ5VUD6 431 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
CCNA1-201ENST00000255465 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 HMGN2P46Q86SG4 172 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 TMEM252Q8N6L7 170 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 NT5CQ8TCD5 201 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 RNF133Q8WVZ7 376 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 MMABQ96EY8 250 aaPredicted RBP10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF665Q9H7R5 613 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 NAA60Q9H7X0 242 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 JKAMPQ9P055 326 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 KCNE3Q9Y6H6 103 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 A0A1B0GUS0 222 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 C9orf118A6NHY6 69 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF737O75373 536 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF324O75467 553 aaPredicted RBP10.06□□□□□ -0.8
CCNA1-201ENST00000255465 KLF7O75840 302 aaPredicted RBP10.06□□□□□ -0.8
CCNA1-201ENST00000255465 OMGP23515 440 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 GRPRP30550 384 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 MDH2P40926 338 aaKnown RBP10.06□□□□□ -0.8
CCNA1-201ENST00000255465 AMTP48728 403 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 PMP22Q01453 160 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ROM1Q03395 351 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 C1orf140Q5VVS0 124 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 WBP2NLQ6ICG8 309 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 LINC00114Q6XXX2 140 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 PRSS41Q7RTY9 318 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 SCCPDHQ8NBX0 429 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ZNRF4Q8WWF5 429 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 NMNAT3Q96T66 252 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ULBP2Q9BZM5 246 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 METTL7AQ9H8H3 244 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 DAPP1Q9UN19 280 aa10.06□□□□□ -0.8
CCNA1-201ENST00000255465 ANKRD30BLA7E2S9 258 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 ATXN7O15265 892 aaPredicted RBP10.05□□□□□ -0.8
CCNA1-201ENST00000255465 NUDT3O95989 172 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 PI3P19957 117 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 FBLP22087 321 aaKnown RBP10.05□□□□□ -0.8
CCNA1-201ENST00000255465 F2RP25116 425 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 UNC119Q13432 240 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 ATP1A1-AS1Q5TC04 95 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
CCNA1-201ENST00000255465 ZNF418Q8TF45 676 aaPredicted RBP10.05□□□□□ -0.8
CCNA1-201ENST00000255465 SPSB4Q96A44 273 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 CHRDL1Q9BU40 450 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 GNB1LQ9BYB4 327 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
CCNA1-201ENST00000255465 TMEM140Q9NV12 185 aa10.05□□□□□ -0.8
CCNA1-201ENST00000255465 A0A0A6YYD5 115 aa10.04□□□□□ -0.8
CCNA1-201ENST00000255465 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms