RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 FAM53AQ6NSI3 398 aaPredicted RBP13.16□□□□□ -0.3
RFX1-201ENST00000254325 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 RPUSD4Q96CM3 377 aaKnown RBP13.16□□□□□ -0.3
RFX1-201ENST00000254325 JPT1Q9UK76 154 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 K7N7A8 449 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 TMEM50AO95807 157 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 CRYBA1P05813 215 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 NQO2P16083 231 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 RTP5Q14D33 572 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 C21orf62-AS1Q17RA5 79 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 RND1Q92730 232 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 RAB29O14966 203 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 APOA2P02652 100 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 OR10G4Q8NGN3 311 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 OR5B12Q96R08 314 aa13.16□□□□□ -0.3
RFX1-201ENST00000254325 MRPL37Q9BZE1 423 aaKnown RBP13.16□□□□□ -0.3
RFX1-201ENST00000254325 HPRT1P00492 218 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 CD5P06127 495 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 RPL30P62888 115 aaKnown RBP13.15□□□□□ -0.3
RFX1-201ENST00000254325 ACOT6Q3I5F7 207 aaPredicted RBP13.15□□□□□ -0.3
RFX1-201ENST00000254325 RPL39P5Q59GN2 51 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.3
RFX1-201ENST00000254325 RPRMQ9NS64 109 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 A0A1W2PPE2 198 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 OR4A8P0C604 315 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 TIMP3P35625 211 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 TCF15Q12870 199 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 DHRS7BQ6IAN0 325 aaPredicted RBP13.15□□□□□ -0.3
RFX1-201ENST00000254325 OR10X1Q8NGY0 326 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 OR4F4Q96R69 305 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 ACTL6BO94805 426 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 S100PP25815 95 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 SERF2P84101 59 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 VKORC1L1Q8N0U8 176 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 RBMXL3Q8N7X1 1067 aaKnown RBP13.15□□□□□ -0.3
RFX1-201ENST00000254325 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
RFX1-201ENST00000254325 TRAV38-1A0A0B4J264 116 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 H3BQ15 152 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 NDUFB3O43676 98 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 OPN1MWP04001 364 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 OPN1MW2P0DN77 364 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 OPN1MW3P0DN78 364 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 C15orf54Q8N8G6 183 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 DKK4Q9UBT3 224 aa13.15□□□□□ -0.31
RFX1-201ENST00000254325 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
RFX1-201ENST00000254325 ZNF585BQ52M93 769 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 NCR3LG1Q68D85 454 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 SMIM7Q9BQ49 75 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 PLCE1Q9P212 2302 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 FAM90A27PA6NNH2 459 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
RFX1-201ENST00000254325 ZNF737O75373 536 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 HRASP01112 189 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
RFX1-201ENST00000254325 CCL20P78556 96 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 IGFL3Q6UXB1 125 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
RFX1-201ENST00000254325 IGLV1-44P01699 117 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 MT-ND4LP03901 98 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 FBP1P09467 338 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 SELLP14151 372 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 SMDT1Q9H4I9 107 aa13.14□□□□□ -0.31
RFX1-201ENST00000254325 GCSAMQ8N6F7 178 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 ZNF525Q8N782 197 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 ARV1Q9H2C2 271 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.13□□□□□ -0.31
RFX1-201ENST00000254325 RAB13P51153 203 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 LINC00205P59089 165 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 LRRC10Q5BKY1 277 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 PCSK5Q92824 1860 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 hCG_1809904A0A1W2PP81 198 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 A0A1W2PR64 198 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 A0A1W2PRV1 198 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 C9JQL5 133 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 K7EM74 188 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 LMO1P25800 156 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 DAZAP2Q15038 168 aaPredicted RBP13.13□□□□□ -0.31
RFX1-201ENST00000254325 SCNM1Q9BWG6 230 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 GAL3ST2Q9H3Q3 398 aa13.13□□□□□ -0.31
RFX1-201ENST00000254325 A8MXE2 369 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 FAM216BQ8N7L0 139 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
RFX1-201ENST00000254325 DOCK11Q5JSL3 2073 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 FAM90A1Q86YD7 464 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms