RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CLCC1Q96S66 551 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 TSNAXQ99598 290 aaKnown RBP16.29■□□□□ 0.2
NEDD8-201ENST00000250495 CMSS1Q9BQ75 279 aaKnown RBP16.29■□□□□ 0.2
NEDD8-201ENST00000250495 C12orf4Q9NQ89 552 aa16.29■□□□□ 0.2
NEDD8-201ENST00000250495 METTL1Q9UBP6 276 aaKnown RBP16.29■□□□□ 0.2
NEDD8-201ENST00000250495 FOXI3A8MTJ6 420 aaPredicted RBP16.28■□□□□ 0.2
NEDD8-201ENST00000250495 GABARAPO95166 117 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 SLURP1P55000 103 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 RPS16P62249 146 aaKnown RBP16.28■□□□□ 0.2
NEDD8-201ENST00000250495 PSG5Q15238 335 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 CASTOR1Q8WTX7 329 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 FLYWCH2Q96CP2 140 aaKnown RBP16.28■□□□□ 0.2
NEDD8-201ENST00000250495 YIPF6Q96EC8 236 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 ARHGAP5-AS1Q96IT6 56 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 GFI1Q99684 422 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 FUNDC2Q9BWH2 189 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 PECRQ9BY49 303 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 SLA2Q9H6Q3 261 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 TPSG1Q9NRR2 321 aa16.28■□□□□ 0.2
NEDD8-201ENST00000250495 ARPC1BO15143 372 aaKnown RBP16.27■□□□□ 0.2
NEDD8-201ENST00000250495 PROP1O75360 226 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 SPDEFO95238 335 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 HSPB1P04792 205 aaKnown RBP16.27■□□□□ 0.2
NEDD8-201ENST00000250495 MAP2K4P45985 399 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 PSMD7P51665 324 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 DRAXINQ8NBI3 349 aaPredicted RBP16.27■□□□□ 0.2
NEDD8-201ENST00000250495 LFNGQ8NES3 379 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 OR56B1Q8NGI3 324 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 FAM103A1Q9BTL3 118 aaKnown RBP16.27■□□□□ 0.2
NEDD8-201ENST00000250495 GAB2Q9UQC2 676 aa16.27■□□□□ 0.2
NEDD8-201ENST00000250495 IGHV4OR15-8A0A075B7B6 117 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 A0A087WW49 117 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 TRDCB7Z8K6 153 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 CA2P00918 260 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 APOA2P02652 100 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 RPS25P62851 125 aaKnown RBP16.26■□□□□ 0.19
NEDD8-201ENST00000250495 MLLT11Q13015 90 aaPredicted RBP16.26■□□□□ 0.19
NEDD8-201ENST00000250495 C2orf76Q3KRA6 126 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 ACSM6Q6P461 480 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 ZNF367Q7RTV3 350 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 PDPNQ86YL7 162 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 OR6Q1Q8NGQ2 317 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 FAM3DQ96BQ1 224 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 MS4A10Q96PG2 267 aa16.26■□□□□ 0.19
NEDD8-201ENST00000250495 IGHV3-11P01762 117 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 OR8U9P0C7N5 309 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 CALRP27797 417 aaKnown RBP16.25■□□□□ 0.19
NEDD8-201ENST00000250495 PSMB9P28065 219 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 SERPINB10P48595 397 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 TPPP2P59282 170 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 MRPS15P82914 257 aaKnown RBP16.25■□□□□ 0.19
NEDD8-201ENST00000250495 ZNF383Q8NA42 475 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 RHOVQ96L33 236 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 NAA50Q9GZZ1 169 aaKnown RBP16.25■□□□□ 0.19
NEDD8-201ENST00000250495 RDH8Q9NYR8 311 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 V9GY05 133 aa16.25■□□□□ 0.19
NEDD8-201ENST00000250495 C3orf84H3BNL1 204 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 IGKV1-16P04430 117 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 SPNP16150 400 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 CLDN12P56749 244 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 PITPNAQ00169 270 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.24■□□□□ 0.19
NEDD8-201ENST00000250495 OR4A4PQ8NGN8 299 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 ARPC1AQ92747 370 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 OR4C12Q96R67 309 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 RAB22AQ9UL26 194 aa16.24■□□□□ 0.19
NEDD8-201ENST00000250495 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 TRGV3P03979 118 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 CD3GP09693 182 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 GP9P14770 177 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 LINC00205P59089 165 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 FXYD3Q14802 87 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 PLAC9Q5JTB6 97 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 MGLLQ99685 303 aa16.23■□□□□ 0.19
NEDD8-201ENST00000250495 M0R1X1 148 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 LDLRAD4O15165 306 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 SLC25A17O43808 307 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 CNIH1O95406 144 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 LGALS7P47929 136 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 FABP5Q01469 135 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 CTF1Q16619 201 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 ELOVL1Q9BW60 279 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 ZNF355PQ9NSJ1 428 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 SLC35D1Q9NTN3 355 aa16.22■□□□□ 0.19
NEDD8-201ENST00000250495 H3BUA1 57 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 FABP7O15540 132 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 TAGLNQ01995 201 aaKnown RBP16.21■□□□□ 0.19
NEDD8-201ENST00000250495 LINC00299Q6ZSB3 139 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 SBSPONQ8IVN8 264 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 GRPEL2Q8TAA5 225 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 RAB3CQ96E17 227 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 TMEM68Q96MH6 324 aa16.21■□□□□ 0.19
NEDD8-201ENST00000250495 RANGRFQ9HD47 186 aaPredicted RBP16.21■□□□□ 0.19
NEDD8-201ENST00000250495 A0A0G2JLM5 398 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 TMEM272A0A1B0GTI8 110 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 C13orf42A0A1B0GVH6 325 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 PDCD5O14737 125 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 BET1O15155 118 aa16.2■□□□□ 0.18
NEDD8-201ENST00000250495 SNRPBP14678 240 aaKnown RBP16.2■□□□□ 0.18
NEDD8-201ENST00000250495 HES5Q5TA89 166 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms