RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PRO1933Q9H354 126 aa10.61□□□□□ -0.71
RAB3IP-201ENST00000247833 PATZ1Q9HBE1 687 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-201ENST00000247833 OOEPA6NGQ2 149 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BKO60814 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BJP06899 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BOP23527 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BBP33778 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BDP58876 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 ERVK-16P61578 105 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BCP62807 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 SERF2P84101 59 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 ZNF726P1Q15940 193 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 SRSF7Q16629 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST2H2BEQ16778 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 BSXQ3C1V8 233 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 PEAR1Q5VY43 1037 aaPredicted RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 OR8G5Q8NG78 346 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 OR13A1Q8NGR1 328 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 OR13D1Q8NGV5 346 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BHQ93079 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 LEAP2Q969E1 77 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BNQ99877 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 HIST1H2BMQ99879 126 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 TMEM147Q9BVK8 224 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 ZNF705GA8MUZ8 300 aaPredicted RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 SLC25A6P12236 298 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 RPP25LQ8N5L8 163 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 CISD1Q9NZ45 108 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 SPRY3O43610 288 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 DEFB109BQ30KR1 87 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 DPPA3Q6W0C5 159 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 FDCSPQ8NFU4 85 aa10.6□□□□□ -0.71
RAB3IP-201ENST00000247833 M0R296 226 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 FAM90A2PQ658T7 463 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 ACSM6Q6P461 480 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 MDS2Q8NDY4 140 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 R3HDM4Q96D70 268 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 OPN3Q9H1Y3 402 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 SPAARA0A1B0GVQ0 90 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 A0A1B0GW64 132 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 CYB5R3P00387 301 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 CEACAM1P13688 526 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 CDX1P47902 265 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 TRIP6Q15654 476 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 DEFB124Q8NES8 71 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 RAB24Q969Q5 203 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 CXXC4Q9H2H0 198 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 OR51M1Q9H341 326 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 M0R1B8 84 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 IGHV2-5P01817 119 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 OPN1MWP04001 364 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 OPN1MW2P0DN77 364 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 OPN1MW3P0DN78 364 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 ZNF66Q6ZN08 573 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
RAB3IP-201ENST00000247833 MLNRO43193 412 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 HOXA5P20719 270 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 GALR1P47211 349 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 GCSAMLQ5JQS6 135 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 NAT8Q9UHE5 227 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 MARCH11A6NNE9 402 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 CDC34P49427 236 aaPredicted RBP10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 DEFA6Q01524 100 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 FAM201AQ5SY85 155 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 INO80CQ6PI98 192 aaPredicted RBP10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 SSMEM1Q8WWF3 244 aa10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 PSMG3Q9BT73 122 aaPredicted RBP10.58□□□□□ -0.72
RAB3IP-201ENST00000247833 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 CDX4O14627 284 aaPredicted RBP10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 IGLV2-14P01704 120 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 CECR9P0C854 216 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 FOXF2Q12947 444 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 GABRA6Q16445 453 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 TAAR6Q96RI8 345 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 ENY2Q9NPA8 101 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 CTXND1A0A1B0GTU2 59 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 C19orf67A6NJJ6 358 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 SEC14L6B5MCN3 397 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 TNFSF10P50591 281 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 ZNF146Q15072 292 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 PYY3Q5JQD4 70 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 ZNRF1Q8ND25 227 aa10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 CIB3Q96Q77 187 aaPredicted RBP10.57□□□□□ -0.72
RAB3IP-201ENST00000247833 PARLQ9H300 379 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms