RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TRIP6Q15654 476 aaKnown RBP18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 PRAMEF6Q5VXH4 476 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 OR8G2PQ6IF36 304 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 VWA1Q6PCB0 445 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 MRGPRGQ86SM5 289 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 TCTEX1D1Q8N7M0 179 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 C9orf106Q8NAJ2 232 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 MAP1LC3BQ9GZQ8 125 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 VAX2Q9UIW0 290 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 AQP7O14520 342 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 TIMM8AO60220 97 aaPredicted RBP18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 WISP2O76076 250 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 GABRA2P47869 451 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 ELLP55199 621 aaPredicted RBP18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 FDCSPQ8NFU4 85 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 MRGPRDQ8TDS7 321 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 PRO1933Q9H354 126 aa18.11■□□□□ 0.49
SH2D3A-201ENST00000245908 PCNX2A6NKB5 2137 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 C17orf98A8MV24 154 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 IFNL4K9M1U5 179 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 NKX2-8O15522 239 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 IFNA1P01562 189 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 CCL11P51671 97 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 ATP6V1FQ16864 119 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 MISP3Q96FF7 219 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 TGOLN2O43493 480 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 CECR9P0C854 216 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 URGCP-MRPS24S4R325 110 aa18.1■□□□□ 0.49
SH2D3A-201ENST00000245908 CHD3Q12873 2000 aaKnown RBP18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 RAB29O14966 203 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 CLDN14O95500 239 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TRGC2P03986 189 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TFF1P04155 84 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 FABP4P15090 132 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 IGFL2Q6UWQ7 119 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TMEM68Q96MH6 324 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 RBM14Q96PK6 669 aaKnown RBP18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TMEM242Q9NWH2 141 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 METRNQ9UJH8 293 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TGIF2-C20orf24A0A0A6YYL0 155 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 A0A1B0GWJ7 208 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 PMS2P5A8MQ11 134 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 CYB5BO43169 146 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 COL10A1Q03692 680 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 SMIM21Q3B7S5 101 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 PDZD11Q5EBL8 140 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TAAR6Q96RI8 345 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 TMEM147Q9BVK8 224 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 MRPL37Q9BZE1 423 aaKnown RBP18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 SDF2L1Q9HCN8 221 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 CLN8Q9UBY8 286 aa18.09■□□□□ 0.49
SH2D3A-201ENST00000245908 CEBPZOSA8MTT3 80 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 IGKV1D-33P01593 117 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 IGKV1-33P01594 117 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 BTNL3Q6UXE8 466 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 ZNF66Q6ZN08 573 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 RPP25LQ8N5L8 163 aaKnown RBP18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 OR13A1Q8NGR1 328 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 PACRGQ96M98 296 aaPredicted RBP18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 PPP1R14DQ9NXH3 145 aa18.08■□□□□ 0.48
SH2D3A-201ENST00000245908 CYB5R3P00387 301 aaPredicted RBP18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 IGLV1-44P01699 117 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 SSTR5P35346 364 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 SRSF6Q13247 344 aaKnown RBP18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 ZNF718Q3SXZ3 478 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 MSL2Q9HCI7 577 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 SLC39A9Q9NUM3 307 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 FZR1Q9UM11 496 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 LAMP3Q9UQV4 416 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 FRYQ5TBA9 3013 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 PRR33A8MZF0 331 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 TCAPO15273 167 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 CD55P08174 381 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 TRGC1P0CF51 173 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 RND2P52198 227 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 ACSM6Q6P461 480 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 DTD1Q8TEA8 209 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 LHX4Q969G2 390 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 RAB24Q969Q5 203 aa18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 NOL4LQ96MY1 436 aaPredicted RBP18.07■□□□□ 0.48
SH2D3A-201ENST00000245908 SMCO3A2RU48 225 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 FABP6P51161 128 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 PAX5Q02548 391 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 MBNL2Q5VZF2 373 aaKnown RBP18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 FAM180AQ6UWF9 173 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 SARAFQ96BY9 339 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 CIB3Q96Q77 187 aaPredicted RBP18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 PLSCR4Q9NRQ2 329 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 ZG16O60844 167 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 ZNF737O75373 536 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 GCH1P30793 250 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 H2BFWTQ7Z2G1 175 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 TPRX1Q8N7U7 411 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 ABHD5Q8WTS1 349 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 HSD17B10Q99714 261 aaKnown RBP18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 USF3Q68DE3 2245 aa18.06■□□□□ 0.48
SH2D3A-201ENST00000245908 DIDO1Q9BTC0 2240 aaKnown RBP18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 TRAV17A0A0B4J275 112 aa18.05■□□□□ 0.48
SH2D3A-201ENST00000245908 IGHV2OR16-5A0A0B4J2B6 119 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms