RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 MOB1BQ7L9L4 216 aa10.63□□□□□ -0.71
HIF3A-201ENST00000244302 FAM185AQ8N0U4 392 aa10.63□□□□□ -0.71
HIF3A-201ENST00000244302 OR10C1Q96KK4 312 aa10.63□□□□□ -0.71
HIF3A-201ENST00000244302 SLC2A9Q9NRM0 540 aa10.63□□□□□ -0.71
HIF3A-201ENST00000244302 KBTBD11-OT1A0A1B0GTJ5 212 aa10.62□□□□□ -0.71
HIF3A-201ENST00000244302 CTSDP07339 412 aaPredicted RBP10.62□□□□□ -0.71
HIF3A-201ENST00000244302 GZMHP20718 246 aa10.62□□□□□ -0.71
HIF3A-201ENST00000244302 PAX6P26367 422 aa10.62□□□□□ -0.71
HIF3A-201ENST00000244302 LRRC10Q5BKY1 277 aa10.62□□□□□ -0.71
HIF3A-201ENST00000244302 PARP11Q9NR21 331 aa10.62□□□□□ -0.71
HIF3A-201ENST00000244302 CLN8Q9UBY8 286 aa10.62□□□□□ -0.71
HIF3A-201ENST00000244302 TRGV10A0A0A0MS01 117 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 C22orf46C9J442 243 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 PROP1O75360 226 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 JTBO76095 146 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 DIRAS3O95661 229 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 HOXB5P09067 269 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 ZFP36P26651 326 aaKnown RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 GPR6P46095 362 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 RAB13P51153 203 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 AKR1C2P52895 323 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 TMEM33P57088 247 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 AKR1C1Q04828 323 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 BTNL3Q6UXE8 466 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 SGPP2Q8IWX5 399 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 C11orf42Q8N5U0 333 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 RAB1CQ92928 201 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 SAV1Q9H4B6 383 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 BIN3Q9NQY0 253 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 UNC79Q9P2D8 2635 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 AKAP9Q99996 3911 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 IFNA21P01568 189 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 CTXN2P0C2S0 81 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 HKR1P10072 659 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 F2RL1P55085 397 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 ATP5J2P56134 94 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 MRPS11P82912 194 aaKnown RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 MORN2Q502X0 79 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 WDR25Q64LD2 544 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 RTN4IP1Q8WWV3 396 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 TP53RKQ96S44 253 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 AGMATQ9BSE5 352 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 PLEKHA2Q9HB19 425 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 OR6C3Q9NZP0 311 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 GNG12Q9UBI6 72 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 PSG11Q9UQ72 335 aa10.61□□□□□ -0.71
HIF3A-201ENST00000244302 RBM7Q9Y580 266 aaKnown RBP10.61□□□□□ -0.71
HIF3A-201ENST00000244302 SPINT2O43291 252 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 OR5AC1P0C628 307 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 GNG10P50151 68 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 S100A10P60903 97 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 COMMD1Q8N668 190 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 ABCA2Q9BZC7 2435 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 CRYM-AS1A6NIL9 109 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 K7EPK0 472 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 F2RL2O00254 374 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 FBXO24O75426 580 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 MED6O75586 246 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 DEDDO75618 318 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 CD5P06127 495 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
HIF3A-201ENST00000244302 IAH1Q2TAA2 248 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-201ENST00000244302 ABCA11PQ4W5N1 156 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 CT45A1Q5HYN5 189 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 BTNL8Q6UX41 500 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 TBC1D26Q86UD7 250 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 DMBX1Q8NFW5 382 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 OR51H1Q8NH63 302 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 CT45A3Q8NHU0 189 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 TIMD4Q96H15 378 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 HRH4Q9H3N8 390 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 GSKIPQ9P0R6 139 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 KCNS2Q9ULS6 477 aa10.6□□□□□ -0.71
HIF3A-201ENST00000244302 PDZD2O15018 2839 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 hADV38S2A0JD32 116 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 RNASEK-C17orf49H0YIS7 233 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
HIF3A-201ENST00000244302 FOLR2P14207 255 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 RPL12P30050 165 aaKnown RBP10.59□□□□□ -0.71
HIF3A-201ENST00000244302 NPBWR1P48145 328 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 UCP3P55916 312 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 DLX6P56179 175 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 RPL30P62888 115 aaKnown RBP10.59□□□□□ -0.71
HIF3A-201ENST00000244302 RPL39P5Q59GN2 51 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 RPL7L1Q6DKI1 246 aaKnown RBP10.59□□□□□ -0.71
HIF3A-201ENST00000244302 DRAM1Q8N682 238 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 LYPD6BQ8NI32 183 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 CORO2AQ92828 525 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
HIF3A-201ENST00000244302 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
HIF3A-201ENST00000244302 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
HIF3A-201ENST00000244302 MPPED1O15442 326 aa10.58□□□□□ -0.72
HIF3A-201ENST00000244302 IFNA4P05014 189 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms