RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 SAA2P0DJI9 122 aaPredicted RBP11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 IGFBP2P18065 325 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 PVALBP20472 110 aaPredicted RBP11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 DLX6P56179 175 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 PDZD9Q8IXQ8 264 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 RAB1BQ9H0U4 201 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 BARX1Q9HBU1 254 aaPredicted RBP11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 FGF16O43320 207 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 LY6HO94772 140 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 FAM157CP0CG43 387 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 GNG10P50151 68 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 CAV2P51636 162 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 VAMP2P63027 116 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 CD300LFQ8TDQ1 290 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 LPAR3Q9UBY5 353 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 IGSF10Q6WRI0 2623 aa11.3□□□□□ -0.6
SNRNP27-201ENST00000244227 CFAP46Q8IYW2 2715 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 HRNRQ86YZ3 2850 aaPredicted RBP11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 TOR1AO14656 332 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 RAB29O14966 203 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 SYNGR2O43760 224 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 FCGR3BO75015 233 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 JTBO76095 146 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 MRPS11P82912 194 aaKnown RBP11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 TMEM155Q4W5P6 130 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 LYG1Q8N1E2 194 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 ZNRD1Q9P1U0 126 aa11.29□□□□□ -0.6
SNRNP27-201ENST00000244227 WRBO00258 174 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.64e-6■■■■□ 21.2
SNRNP27-201ENST00000244227 ATG12O94817 140 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 HPRT1P00492 218 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 DAOP14920 347 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 EIF5AP63241 154 aaKnown RBP11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 LAMP3Q9UQV4 416 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 USP24Q9UPU5 2620 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 TXNL1O43396 289 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 AVPI1Q5T686 147 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 NEU4Q8WWR8 484 aaPredicted RBP11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 R3HDM4Q96D70 268 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 SLC25A31Q9H0C2 315 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
SNRNP27-201ENST00000244227 MFSD2BA6NFX1 497 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 MARCH11A6NNE9 402 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 TNFRSF9Q07011 255 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 AANATQ16613 207 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 SMIM8Q96KF7 97 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 S1PR3Q99500 378 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 RALYQ9UKM9 306 aaKnown RBP11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 WSB1Q9Y6I7 421 aa11.27□□□□□ -0.61
SNRNP27-201ENST00000244227 TRBV23-1A0A0A0MS06 115 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 TEX46H3BTG2 121 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 CST7O76096 145 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 CT45A6P0DMU7 189 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 CT45A5P0DMU8 189 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 CT45A7P0DMV0 189 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 IAPPP10997 89 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 THBS3P49746 956 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 UBE2KP61086 200 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 BAXQ07812 192 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 H2BFWTQ7Z2G1 175 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 ZNF596Q8TC21 504 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 RBKSQ9H477 322 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 LRBAP50851 2863 aa11.26□□□□□ -0.61
SNRNP27-201ENST00000244227 A0A087X0M5 115 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 A0A1B0GX30 115 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 H3BP45 60 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 DYNLT3P51808 116 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 TAS2R30P59541 319 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 RPL23AP62750 156 aaKnown RBP11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 AARDQ4LEZ3 155 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 ZNF833PQ6ZTB9 187 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 RNF141Q8WVD5 230 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 RBMXL1Q96E39 390 aaKnown RBP11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 PSENENQ9NZ42 101 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 YLPM1P49750 1951 aaKnown RBP11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 BORCS7-ASMTA0A0B4J1R7 106 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 FBXO24O75426 580 aa11.25□□□□□ -0.61
SNRNP27-201ENST00000244227 CLINT1Q14677 625 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms