RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 S100A9P06702 114 aaKnown RBP12.27□□□□□ -0.45
CCDC47-201ENST00000225726 DANCRP0C864 163 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 LYNX1P0DP58 116 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 EPHA1P21709 976 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 ID3Q02535 119 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 PRAMEF5Q5TYX0 476 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 SPAG16Q8N0X2 631 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.27□□□□□ -0.45
CCDC47-201ENST00000225726 ZNF439Q8NDP4 499 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.45
CCDC47-201ENST00000225726 GSX2Q9BZM3 304 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 CYTL1Q9NRR1 136 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 NBASA2RRP1 2371 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 C17orf98A8MV24 154 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 C19orf84I3L1E1 186 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 SLC31A2O15432 143 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 GPR137BO60478 399 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 SOD3P08294 240 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 IGFBP2P18065 325 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 PVALBP20472 110 aaPredicted RBP12.27□□□□□ -0.45
CCDC47-201ENST00000225726 NFYBP25208 207 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 GPR157Q5UAW9 335 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 H1FXQ92522 213 aaKnown RBP12.27□□□□□ -0.45
CCDC47-201ENST00000225726 PHYHIPLQ96FC7 376 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 ZNF714Q96N38 554 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 LINC00473A8K010 186 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 RAMP3O60896 148 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 DUTP33316 252 aaKnown RBP12.26□□□□□ -0.45
CCDC47-201ENST00000225726 MRPS11P82912 194 aaKnown RBP12.26□□□□□ -0.45
CCDC47-201ENST00000225726 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 CXorf66Q5JRM2 361 aaPredicted RBP12.26□□□□□ -0.45
CCDC47-201ENST00000225726 TMEM200BQ69YZ2 307 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 PKDREJQ9NTG1 2253 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 MMP9P14780 707 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 BRWD1-AS2P59051 145 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 OR2B11Q5JQS5 317 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 FAM74A1Q5RGS3 127 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 MMP24Q9Y5R2 645 aa12.26□□□□□ -0.45
CCDC47-201ENST00000225726 IGHV3-7P01780 117 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 ZNF816Q0VGE8 651 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-201ENST00000225726 ZNF124Q15973 351 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 LINC00862A6NCI5 91 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 M0R1X1 148 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 PROP1O75360 226 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 MMP23AO75900 390 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 TPT1P13693 172 aaKnown RBP12.25□□□□□ -0.45
CCDC47-201ENST00000225726 DAOP14920 347 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 UTF1Q5T230 341 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 HEPN1Q6WQI6 88 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 RHOVQ96L33 236 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 LAMP3Q9UQV4 416 aa12.25□□□□□ -0.45
CCDC47-201ENST00000225726 TPRP12270 2363 aaKnown RBP12.25□□□□□ -0.45
CCDC47-201ENST00000225726 RBM14Q96PK6 669 aaKnown RBP12.25□□□□□ -0.45
CCDC47-201ENST00000225726 KALRNO60229 2985 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 SSSCA1O60232 199 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 S1PR2O95136 353 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 RPL39P5Q59GN2 51 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 Q6ZRM9 215 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 CBLN2Q8IUK8 224 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 MIOXQ9UGB7 285 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 A0A1W2PPR1 153 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 RAB29O14966 203 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 P0C879 139 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 KIR2DS2P43631 304 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 VAMP2P63027 116 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 NCR3LG1Q68D85 454 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 SLC25A48Q6ZT89 311 aaKnown RBP12.24□□□□□ -0.45
CCDC47-201ENST00000225726 PFDN5Q99471 154 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 SPOCK3Q9BQ16 436 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 MAGT1Q9H0U3 335 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 COA4Q9NYJ1 87 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 WRBO00258 174 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 F12P00748 615 aaPredicted RBP12.24□□□□□ -0.45
CCDC47-201ENST00000225726 CCL3L1P16619 93 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 IZUMO4Q1ZYL8 232 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 RAB39BQ96DA2 213 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 FBXL17Q9UF56 701 aa12.24□□□□□ -0.45
CCDC47-201ENST00000225726 KIAA1324LA8MWY0 1029 aaPredicted RBP12.23□□□□□ -0.45
CCDC47-201ENST00000225726 GNG10P50151 68 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 EIF5AP63241 154 aaKnown RBP12.23□□□□□ -0.45
CCDC47-201ENST00000225726 BAP18Q8IXM2 172 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 GSN-AS1Q9NRJ2 163 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 ACACBO00763 2458 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 SAA2-SAA4A0A096LPE2 208 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 A0A1W2PPE3 182 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 SAA2P0DJI9 122 aaPredicted RBP12.23□□□□□ -0.45
CCDC47-201ENST00000225726 G6PCP35575 357 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 TMEM33P57088 247 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 ODF3L1Q8IXM7 274 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 OR2C3Q8N628 320 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 A6NNC1 897 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC47-201ENST00000225726 DLX6P56179 175 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 TMEM155Q4W5P6 130 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 SLC25A32Q9H2D1 315 aa12.23□□□□□ -0.45
CCDC47-201ENST00000225726 UBTD1Q9HAC8 227 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms