RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 PRR31Q5SQ13 230 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 ZNF660Q6AZW8 331 aaPredicted RBP10.93□□□□□ -0.66
UPK1A-201ENST00000222275 CMTM1Q8IZ96 169 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 OR8H1Q8NGG4 311 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 OR56B4Q8NH76 319 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 CFHR4Q92496 578 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 HSD17B10Q99714 261 aaKnown RBP10.93□□□□□ -0.66
UPK1A-201ENST00000222275 PRRT1Q99946 306 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 NABP2Q9BQ15 211 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 ZNF251Q9BRH9 671 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 SLC5A7Q9GZV3 580 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 SDHAF2Q9NX18 166 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 SCP2D1Q9UJQ7 156 aa10.93□□□□□ -0.66
UPK1A-201ENST00000222275 CENPXA8MT69 81 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 M0R1X1 148 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 NDUFA7O95182 113 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 MOSP00540 346 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 AMY2AP04746 511 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 CD40LGP29965 261 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 UCP3P55916 312 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 FXYD4P59646 89 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 EBI3Q14213 229 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 HES1Q14469 280 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 RPL39P5Q59GN2 51 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 ZNF66Q6ZN08 573 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 Q6ZSV7 163 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 OR5AN1Q8NGI8 311 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 TERB2Q8NHR7 220 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 LINC01006Q8NI28 216 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 PIFOQ8TCI5 191 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 SECTM1Q8WVN6 248 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 RNF5Q99942 180 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 CCDC32Q9BV29 185 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 MRPL20Q9BYC9 149 aaKnown RBP10.92□□□□□ -0.66
UPK1A-201ENST00000222275 TINAGL1Q9GZM7 467 aaPredicted RBP10.92□□□□□ -0.66
UPK1A-201ENST00000222275 AKIP1Q9NQ31 210 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 PRELID3BQ9Y3B1 194 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 NOTCH3Q9UM47 2321 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 DNAH3Q8TD57 4116 aa10.92□□□□□ -0.66
UPK1A-201ENST00000222275 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 A6NDX4 124 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 J3QRK9 145 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 M0QYG6 137 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 KCNAB3O43448 404 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 WIPF1O43516 503 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 OR2F2O95006 317 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 IGKV1D-33P01593 117 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 IGKV1-33P01594 117 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 SNRNP70P08621 437 aaKnown RBP10.91□□□□□ -0.66
UPK1A-201ENST00000222275 CT45A6P0DMU7 189 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 CT45A5P0DMU8 189 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 CT45A7P0DMV0 189 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 TMEM11P17152 192 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 PPP5CP53041 499 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 CATR1Q13166 79 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 ZNF846Q147U1 533 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 LY6EQ16553 131 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 RTL8BQ17RB0 113 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 DHRS7BQ6IAN0 325 aaPredicted RBP10.91□□□□□ -0.66
UPK1A-201ENST00000222275 PDPNQ86YL7 162 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 SLC38A6Q8IZM9 456 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 TRIM63Q969Q1 353 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 ZNF486Q96H40 463 aaPredicted RBP10.91□□□□□ -0.66
UPK1A-201ENST00000222275 WASHC3Q9Y3C0 194 aa10.91□□□□□ -0.66
UPK1A-201ENST00000222275 IGKV1D-13A0A0B4J2D9 117 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 NAP1L6A6NFF2 107 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 H7C2Y5 167 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 GPR31O00270 319 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 IGKV1-13P0DP09 117 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 DUTP33316 252 aaKnown RBP10.9□□□□□ -0.66
UPK1A-201ENST00000222275 PROK1P58294 105 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 SURF2Q15527 256 aaPredicted RBP10.9□□□□□ -0.66
UPK1A-201ENST00000222275 SCGB2B2Q4G0G5 96 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 ZNF57Q68EA5 555 aaPredicted RBP10.9□□□□□ -0.66
UPK1A-201ENST00000222275 LHFPL1Q86WI0 220 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 MFSD4AQ8N468 514 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 BVESQ8NE79 360 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 OR4C16Q8NGL9 310 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 ZFAND1Q8TCF1 268 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 EAF1Q96JC9 268 aaPredicted RBP10.9□□□□□ -0.66
UPK1A-201ENST00000222275 RBM14Q96PK6 669 aaKnown RBP10.9□□□□□ -0.66
UPK1A-201ENST00000222275 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
UPK1A-201ENST00000222275 NPFFR1Q9GZQ6 430 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 CCL28Q9NRJ3 127 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 MCUBQ9NWR8 336 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 SLC2A8Q9NY64 477 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 SIGLEC9Q9Y336 463 aa10.9□□□□□ -0.66
UPK1A-201ENST00000222275 H0YJW9 148 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 PROP1O75360 226 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 KIR2DS2P43631 304 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 KLF9Q13886 244 aaPredicted RBP10.89□□□□□ -0.67
UPK1A-201ENST00000222275 TCTEX1D1Q8N7M0 179 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 POC5Q8NA72 575 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 OR4C13Q8NGP0 309 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 OR4F5Q8NH21 305 aa10.89□□□□□ -0.67
UPK1A-201ENST00000222275 FLYWCH2Q96CP2 140 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms