RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PROP1O75360 226 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 IGKV1-39P01597 117 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 IGKV1D-39P04432 117 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CCL3L1P16619 93 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ATF4P18848 351 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 NFYBP25208 207 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 Q3ZCU0 254 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 PRAMEF5Q5TYX0 476 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 UQCC3Q6UW78 93 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 BSCL2Q96G97 398 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF714Q96N38 554 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 MAP1AP78559 2803 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TRIM77I1YAP6 450 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ITGB1BP1O14713 200 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 GPR12P47775 334 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ERVFRD-1P60508 538 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CLEC9AQ6UXN8 241 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ABHD14AQ9BUJ0 271 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 LPAR3Q9UBY5 353 aa16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RPUSD1Q9UJJ7 312 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 KLF2Q9Y5W3 355 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-201ENST00000162749 E5RGE8 158 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ARHGDIBP52566 201 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 AKR1C2P52895 323 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 AKR1C1Q04828 323 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TMEM30BQ3MIR4 351 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CT45A1Q5HYN5 189 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF841Q6ZN19 808 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CT45A3Q8NHU0 189 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SMIM3Q9BZL3 60 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 PLEKHA2Q9HB19 425 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 NSG2Q9Y328 171 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 WNK2Q9Y3S1 2297 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 LINC00473A8K010 186 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF705EA8MWA4 302 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RAMP3O60896 148 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 NDUFS7O75251 213 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 LINC00205P59089 165 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SRSF3P84103 164 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CATR1Q13166 79 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 FAM122CQ6P4D5 195 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF439Q8NDP4 499 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 OR4D5Q8NGN0 318 aa16.18■□□□□ 0.18
TNFRSF1A-201ENST00000162749 USP9YO00507 2555 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 A0A1W2PPE3 182 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 PPIHO43447 177 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CLDN1O95832 211 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 GAPDHP04406 335 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 BRWD1-AS2P59051 145 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 EIF5AP63241 154 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 HEPN1Q6WQI6 88 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 DMBX1Q8NFW5 382 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SMIM8Q96KF7 97 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CHODLQ9H9P2 273 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 PIGBOS1A0A0B4J2F0 54 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 A0A0G2JRQ6 117 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CLEC18AA5D8T8 446 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RAB7AP51149 207 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SRSF1Q07955 248 aaKnown RBP eCLIP16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 OR2B11Q5JQS5 317 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF66Q6ZN08 573 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CLEC18CQ8NCF0 446 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 OR10A7Q8NGE5 316 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TCTEX1D2Q8WW35 142 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TIMD4Q96H15 378 aa16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 HSD17B10Q99714 261 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-201ENST00000162749 JTBO76095 146 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 GOSR1O95249 250 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RPL39P5Q59GN2 51 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RAB1CQ92928 201 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 NARS2Q96I59 477 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SPIN2AQ99865 258 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SPIN2BQ9BPZ2 258 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 CELSR2Q9HCU4 2923 aa16.16■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TMEM218A2RU14 115 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 C17orf98A8MV24 154 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 DUTP33316 252 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TMEM155Q4W5P6 130 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SAT2Q96F10 170 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 WFDC1Q9HC57 220 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 MMP26Q9NRE1 261 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TRBV23-1A0A0A0MS06 115 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ST8SIA3O43173 380 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 FBXO24O75426 580 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ADCYAP1P18509 176 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 LPAR6P43657 344 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 GNG10P50151 68 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 C1orf229Q6ZS94 237 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SPAG16Q8N0X2 631 aa16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RCL1Q9Y2P8 373 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SAA2-SAA4A0A096LPE2 208 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 F12P00748 615 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 IGKV1-5P01602 117 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 SAA2P0DJI9 122 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 SULT1A2P50226 295 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 DLX6P56179 175 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 DEFA5Q01523 94 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 EIF5AL1Q6IS14 154 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 SLC25A48Q6ZT89 311 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ODF3L1Q8IXM7 274 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms