RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ube2ql1A0PJN4 161 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ntsr1O88319 424 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tmem231Q3U284 315 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fbxo27Q6DIA9 280 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm16503Q8C6M9 103 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Vmn1r4Q8R2D3 297 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr52Q8VFL0 319 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Slc22a26Q91WJ2 552 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Dmrtc1c1Q9D410 238 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr155Q9QZ22 319 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 TsnaxQ9QZE7 290 aaKnown RBP13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cldn10Q9Z0S6 231 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Syngr4Q9Z1L2 233 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Frem1Q684R7 2191 aa13.57□□□□□ -0.24
Trim39-203ENSMUST00000113706 Arxes1C0HK79 180 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Arxes2C0HK80 180 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Pdcd6P12815 191 aaKnown RBP13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 ElnP54320 860 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 RhodP97348 210 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 SlbpP97440 275 aaKnown RBP13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tle1Q62440 770 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Mob3aQ8BSU7 217 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cnot4Q8BT14 575 aaKnown RBP13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Vmn1r35Q8R2E2 296 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 MynnQ99MD8 610 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fxyd1Q9Z239 92 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ino80eA0A0U1RP99 260 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Zfp334A2A4U6 679 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 SiglechB7ZMQ6 332 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ifna9P09235 190 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Htr2aP35363 471 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1507Q0VEP0 313 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Vmn1r15Q14C10 299 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Srrm4Q8BKA3 608 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ms4a8Q99N10 290 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 DnlzQ9D113 177 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 CstadQ9D245 104 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Kcnip1Q9JJ57 227 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Syt6Q9R0N8 511 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Dmxl2Q8BPN8 3032 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm45844A0A1B0GRQ2 137 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1157A2AVC4 312 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 FblP35550 327 aaKnown RBP13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ovch2Q7M761 609 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 ClmQ7TSN2 230 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Pld4Q8BG07 503 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cd226Q8K4F0 333 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr507Q8VG13 316 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Lmntd1Q9D4C1 413 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Slc25a22Q9D6M3 323 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 Naa10Q9QY36 235 aa13.56□□□□□ -0.24
Trim39-203ENSMUST00000113706 PoleQ9WVF7 2283 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fam98cE9PYD1 344 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ccr8P56484 353 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ppp1cbP62141 327 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Mpc1P63030 109 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm12253Q5NC48 229 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Sat2Q6P8J2 170 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Lhfpl2Q8BGA2 222 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Tmem267Q8VDR5 215 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Wdr77Q99J09 342 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Arpc5Q9CPW4 151 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 3100002H09RikQ9CXW6 140 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Pcnx1Q9QYC1 2344 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr613E9PYB4 317 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 NppaP05125 152 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Hoxb5P09079 269 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gabrr1P56475 480 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Nanos2P60322 136 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ewsr1Q61545 655 aaKnown RBP13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Plcxd1Q8CHS4 345 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cmc2Q8K199 79 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 B3gnt8Q8R3I9 389 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fancd2osQ9D4K4 178 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 EdarQ9R187 448 aa13.55□□□□□ -0.24
Trim39-203ENSMUST00000113706 Flrt1Q6RKD8 674 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr93Q6UAH1 312 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Glrx5Q80Y14 152 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Kazald1Q8BJ66 313 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Q8VE95 218 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Osr2Q91ZD1 312 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 SvbpQ99LQ4 66 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Teddm3Q9CQH1 294 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Carhsp1Q9CR86 148 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm13547A2ARC0 163 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Ear14F6YUX7 155 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm11009F7CWA7 138 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr64F8VPZ8 307 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm20708H3BKF4 155 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Rnase2O35291 155 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fgf12P61329 243 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Mob3cQ8BJG4 216 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Sirt7Q8BKJ9 402 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 C330021F23RikQ8C7T0 141 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr1330Q8VEY6 315 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Olfr943Q9EQ92 314 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Kiaa1549Q68FD9 1940 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Fbn2Q61555 2907 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Gm17657E9PWY5 170 aa13.54□□□□□ -0.24
Trim39-203ENSMUST00000113706 Cpsf4lE9Q2N0 280 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms