RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Mpc2Q9D023 127 aa7.38□□□□□ -1.23
Trim39-201ENSMUST00000042717 9330161L09RikQ9D253 136 aa7.38□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ccdc54Q9DAL3 329 aa7.38□□□□□ -1.23
Trim39-201ENSMUST00000042717 LitafQ9JLJ0 161 aa7.38□□□□□ -1.23
Trim39-201ENSMUST00000042717 Insl6Q9QY05 191 aa7.38□□□□□ -1.23
Trim39-201ENSMUST00000042717 Arhgef17Q80U35 2057 aa7.38□□□□□ -1.23
Trim39-201ENSMUST00000042717 Trav15d-1-dv6d-1A0A075B624 124 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr1130A0A1L1SQT2 314 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr1104A2AVB5 310 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tmem182B2RVY9 229 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vmn2r80E9Q1L0 863 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr902E9Q6Z7 309 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Foxf2O54743 446 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Ccl11P48298 97 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Atp4bP50992 294 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 StomP54116 284 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vmn1r236Q05A06 334 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Anxa7Q07076 463 aaKnown RBP7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Znf691Q3TDE8 283 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cfhr1Q61406 343 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rbm38Q62176 237 aaKnown RBP7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rhbdd1Q8BHC7 315 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Thap7Q8VCZ3 309 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr57Q8VGU7 319 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Memo1Q91VH6 297 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr1410E9PYK6 323 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Dbx2F8VQH7 377 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm6882J3KMT3 313 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Scd2P13011 358 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Igfbp3P47878 292 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cd7P50283 210 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Galr1P56479 348 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Sec61a1P61620 476 aaKnown RBP7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rab3cP62823 227 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tubg1P83887 451 aaKnown RBP7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Prop1P97458 223 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm10662Q3UT86 313 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Acsm5Q8BGA8 578 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm10600Q8BQ57 223 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Mob3aQ8BSU7 217 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Bricd5Q8BV89 174 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tmem56Q8CGF5 276 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Snapc5Q8R2K7 98 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tmem267Q8VDR5 215 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 TipinQ91WA1 278 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rwdd2bQ99M03 290 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 SdhdQ9CXV1 159 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tomm40lQ9CZR3 308 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 AplfQ9D842 499 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr951Q9EQ94 314 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 P2ry6Q9ERK9 328 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 Chst5Q9QUP4 395 aa7.37□□□□□ -1.23
Trim39-201ENSMUST00000042717 A630073D07RikE9PWS6 100 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Adamts17E9Q4D1 1122 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vmn2r82G3UWA2 865 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gabra6P16305 453 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gabra2P26048 451 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gsx2P31316 305 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Htr2aP35363 471 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rps23P62267 143 aaKnown RBP7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Q149G0 166 aaKnown RBP7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cd96Q3U0X8 602 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Rtl6Q505G4 243 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Lrrc52Q5M8M9 314 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tacstd2Q8BGV3 317 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vmn1r237Q8R296 289 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 CmipQ9D486 773 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Myo9bQ9QY06 2114 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Hils1Q9QYL0 170 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Igkv4-50A0A0B4J1J0 117 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Pcdhgb8A0A140LI48 931 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Mrgpra9A0A140T8U8 332 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr898L7N1Z5 316 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Atf6bO35451 699 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Bcl2P10417 236 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 P18526 117 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Tnfsf10P50592 291 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Pld6Q5SWZ9 221 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 March1Q6NZQ8 289 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr1126Q7TR49 314 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Wdr82Q8BFQ4 313 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Slc25a41Q8BVN7 312 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Acot12Q9DBK0 556 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Naa10Q9QY36 235 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 OtoglF7A4A7 2325 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 B1ARW8 110 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm572B1ARY8 399 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Nsun4C4P6S0 806 aaKnown RBP7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vmn1r138D3YTY2 306 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Amy2a1E9PV85 245 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm8693E9PW18 306 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm4181E9Q7X3 184 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Olfr773F6VS78 311 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm20918J3QN17 227 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Gm4498K9J7G4 306 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Vmn1r118L7N273 306 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 PhyhO35386 338 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Glp1rO35659 463 aa7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 H1f0P10922 194 aaKnown RBP7.36□□□□□ -1.23
Trim39-201ENSMUST00000042717 Cd5P13379 494 aa7.36□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms